Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03808 ATGGAAAACTCAAACAATTCATTTGAGGTTGATTCCAATGAAGTTCATTCCACTGATGGTGATGATGTCGACGATGCTGATAATGCCGATGAAGATGATTTGGCAGAATTAGATGCAGTTGAAGGCGATGATGATGTCGACGATGCTGATAATGGTGATGAAGATTATTCGGCAGAATTAGATGCAGTTGTAGGCAATGATGATGATGTCGACGATGCTGATAATGGCGATGAAGATGATTCAGCAGAATTAGATGCAGTTGTAGGCGATAAAAGGTATGGTAAATGCAAAGGTTTTTCCATAAGGAAAAGTGATATTAGGAGTAAATGGTCTGAAGACAGTAAAATAATAGTAATGAGGCAATTTGTATGCAACAAGCATGGCTTAAGAGAGGATAAACACTTTTCTAGGTTAGATAGGAAAAGAGATGAGAGACGTATTACCCGTACTAAATGCTTAGCTAGGATTTGTTTGCACTACAACGCCAAAAAGGGTAGATATGTAGTGTCATTTTTTGAAGAGACTCATAACCATGAATTAACCCCATATAGGTTTATGCACTTACACCCCGTTTATCGTCAAATTTATGAAGTGGATAGAGCTCAGATTGATGGTCTTCAGTCACATGGAATTAGAACTTGTCATATAGTGGGGTACATGGTTGCTCTGAAGGGTGGATACGCTAGTGTTGGATTTACAAAGAAAGATCTGTACAATTATTTTGATAAAAAAATGCGTGACCTTATTAAAGATGGTGACATTGCCGCTTCTTTAAATTATCTAAATGTAAAGTCATCTACTGATCCCATGCTATATGCAAAATATGCCTTCAGCGGTGATGGACGACTGAGGTCTCTTTTTTTGGCTGATGGGAGAAATAGATATGACTATTTTTGTTTTGGCGATGTGGTTGCGTTTGACACAACTTACAAGAAGAACAAATACAACTACCCATTGGTTATATTTTCAGGGTGTAACCAGCACTCTCAGACAGTTAATTTTGGTGCTGAGTTGGTATCAGATGAAACATCAGATACCTATAAGTGGTTGTTGAGTTGTTTTTTAGAGTGCATGGATGACAAATACCCACAAGCAGTGGTAACGGATGGGGATGGTGCTATGAAGGAGGCTATAAAACCGATTTTCCCGATGCAACCCATCGGTTATGTGCTAGAGCTAATTAAAGAAAATGGACTTGAAGGAAATCCATGGGTAACCAAGACGTATGAGAACAAGTCACTGTGGGCAACTGCATATTTACGTGACAACTTTTTTGGACGTATAAGAACTACATCTCAATGTGAAGCGATTAATGCAATAATCAAGAGTTACGTTAGGAAGAAAGGCTATATTTTTGAATTTATGCACAATTTTGATGAGGCTCTTAGACACTACAGAAACAATGAACTGGTAGCTGATTTTAAATCCAAGTTTTTAGAAACGGCGTTGACAACTCACCTGCGTTTGATTGAGAGCGATGCCGCTAAAATTTATACAACCGATATTTTCAAAGAAGTTAAAGATGAAATTATGAAGGCTGGTGCGTTGATTGTTAAGAGCTTTGTAAGACATGGTGATGTGAAGATGTACGTGTTGACAAAATATTGTACGGAAAACTATGAAAGAAGAGTTGTTTATGATGGTACAAAATTTCAATGTTCTTGTAAGTTATTTGATTCTCGTGGGCTTCCATGTTCTCATATTTTTTATGTCATGAAGGAAGAACATGTTTCAAACATTCCTTGTAGTATGGTTCTATCGCGCTGGGCAAAGGATGCAAAAATTGAATATTTGAACATGGTTGATAATGGTACAGTAAATTCAAATTCGATGGAGGTTGCCCGTTTTGGTTCATACTGTTCTCTTTTTACCTCTTTTTGCAAAGAAGCTTCAAAGAAGAATGGTGTTTATGGGGAAATAATGGAGGACATCATGAAGTTACACAAAAAATATTGCAGTGCCGACGATCAAATTGGGACACAAAGGGAGGCGGTAGGTGATCCAATAACAGTGAAGAGTAAAGGTGCTCCGAAGAAAAAAAAGAATGACACAAAAGCTGTGAGGCACTGTTCAAAATGCAATAGTACAACTCATAATGCACGGAATTTTTCGAGAAATGTTGAGTTGGAATTGGTGTCAAAAACTGATTCTTTAAGCCAAATTCCTAAGGCACAAGCAGACAAAGCTGCCAGATAA 2196 0.3766 MENSNNSFEVDSNEVHSTDGDDVDDADNADEDDLAELDAVEGDDDVDDADNGDEDYSAELDAVVGNDDDVDDADNGDEDDSAELDAVVGDKRYGKCKGFSIRKSDIRSKWSEDSKIIVMRQFVCNKHGLREDKHFSRLDRKRDERRITRTKCLARICLHYNAKKGRYVVSFFEETHNHELTPYRFMHLHPVYRQIYEVDRAQIDGLQSHGIRTCHIVGYMVALKGGYASVGFTKKDLYNYFDKKMRDLIKDGDIAASLNYLNVKSSTDPMLYAKYAFSGDGRLRSLFLADGRNRYDYFCFGDVVAFDTTYKKNKYNYPLVIFSGCNQHSQTVNFGAELVSDETSDTYKWLLSCFLECMDDKYPQAVVTDGDGAMKEAIKPIFPMQPIGYVLELIKENGLEGNPWVTKTYENKSLWATAYLRDNFFGRIRTTSQCEAINAIIKSYVRKKGYIFEFMHNFDEALRHYRNNELVADFKSKFLETALTTHLRLIESDAAKIYTTDIFKEVKDEIMKAGALIVKSFVRHGDVKMYVLTKYCTENYERRVVYDGTKFQCSCKLFDSRGLPCSHIFYVMKEEHVSNIPCSMVLSRWAKDAKIEYLNMVDNGTVNSNSMEVARFGSYCSLFTSFCKEASKKNGVYGEIMEDIMKLHKKYCSADDQIGTQREAVGDPITVKSKGAPKKKKNDTKAVRHCSKCNSTTHNARNFSRNVELELVSKTDSLSQIPKAQADKAAR 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03808 731 ProSiteProfiles Zinc finger SWIM-type profile. 540 576 IPR007527 GO:0008270
Vivi2g03808 731 Pfam MULE transposase domain 303 384 IPR018289 -
Vivi2g03808 731 MobiDBLite consensus disorder prediction 1 82 - -
Vivi2g03808 731 MobiDBLite consensus disorder prediction 20 82 - -
Vivi2g03808 731 Pfam FAR1 DNA-binding domain 91 181 IPR004330 -
Vivi2g03808 731 SMART 26again6 551 578 IPR006564 GO:0008270
Vivi2g03808 731 PANTHER OS01G0519700 PROTEIN 395 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03808 Vivi-Chr2 149505044 149507615 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi2g03808 FAR1 8.6e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03808 - - vvo:131650306 1407.12