Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03789 ATGACCATAAAAAAGATGGAACTAATAACACCAAAATTGCTTCTTGGTTTCATTATGGTGCTAAGTATTTCTCAAACTTCGGCACATAAATATAATTACCAAGAATTCACAGCTACAAATGATGAACTAGAAGATGAAAGTAGCTTATTAACTTACATTGTTCACGTCAAAAAACCTTCTCTTGATCAATCTAAGGAGAGTTTGCATGGTTGGTACCATTCACTCTTGCCATCCACTACAAAAACTCAGAACCAGAATCGCATTATTTTCTCATACCAAAACATAGTTGATGGTTTTGCCGTCAAGTTGACTCCGGAAGAAGCCAAGACTCTAGAAGAGAAGGACGAGGTTCTCTCAACTCGACCGGAGAAAATTCTTTCGTTGCATACAACTCATACTCCAAGCTTCTTAGGGTTGCAACAAAGTCAGGAGTTGTGGAAGAGTTCTGATCTTGGTAAAGGGATCATAATTGGAATCCTGGACACTGGTATATACCCTTCCCATCCTTCTTTTTCTGATGAAGGAATGCCGTCTCCACCTGCGAAATGGAAAGGCCATTGTGAATTCACAGGAGAGAGGATTTGTAACAACAAGATCATTGGAGCAAGGAACTTCATAAAAAATTCTTCTCTTCCATTCGATGACATTGGCCACGGAACTCACACGGCTAGCACAGCTGCGGGGAGGCCTGTGCAAGGTGCCAATGTCTTTGGCAATGCTAATGGCACAGCAACTGGCATGGCACCAGATGCACACTTGGCAATTTACAAAGTATGCAACATCAACGGTTGTACCGAAAGCGCGATACTAGCTGGAATGGACGCTGCGGTTGAGGATGGTGTTGACGTACTTTCCCTTTCCCTTGGAATACCCTCCATTCCTTTCTTTGAAGACGGGATCGCACTTGGTGCATTTAGTGCAATTCAAAAGGGAATTTTTGTTAGTTGTTCAGCTGCAAATGGAGGTCCTGCTTATGGTACATTGTCCAATGAAGCACCATGGATTCTTACGGTTGGTGCTAGCACAATTGACAGAAAAATAGAAGCAGTAGCAAAGCTTGGAAACGGGGCGGAATATCTTGGAGAATCAGTTTTTCAACCAAAAGACTTTGCATCAACACTATTGCCACTTGTGTATGCAGGTGCACTTAACACAAGTGATGATTCCATTCTCTATTGTAGTCCAACTTCCATGAAGAACATTGATGTTAAGGGAAAGGTAGTTTTGTGTGAGCTAGGTGGATTAGCTGCAAGAATAGCCAAAGGTCAAGCAGTTAAGGATGCTGGTGGTGCTGCCATGATCCTCATGAATAGCGAAAATCACGCTTTCAATCCAATTGCTGATGTTCATGTTCTACCTGCAGTTGATGTAAGTTTCTCAGCTGGTTCATCCATCAAAAAGTATATAAACTCAACTTCAACACCAACAACCACAATTTCATTCCAAGGAACTGTTATCGGAAATCCATTAGCCCCTCAAGTTGCTTCATTTTCATCGAGAGGTCCAAGCAAAGCAAGCCCCGGAATTCTGAAACCCGACATAATCGGACCTGGATTGAACATTCTAGCAGCATGGCCTTCTTCATTAGACAATAGTACACAACCGTTTAACATAATTTCAGGTACCTCAATGTCTTGTCCTCATCTCAGCGGCATTGCAGCGCTGTTGAAAAATTCTCATCCAGATTGGTCACCAGCTGCTATAAAATCAGCAATTATGACAACTGCTAATAAGGTTAATCTTCAAGGAAAAGCTATTTTGGATCAAAGACTTCTACCAGCTGATGTATTTGCGACTGGTGCTGGACATGTTAACCCTTTGAAAGCGAACGATCCAGGACTTGTTTATGATATTGAAACAAATGATTATATTCCTTATTTGTGTGGTTTGAATTACACTGATAAACAAGTTGGACTTATTTTGCAACAGGAAGTGAAATGCTCTGAGGTAAAGAGTATACCACAAGCACAACTTAACTACCCATCATTTTCGATTCGGTTGGGATCCACATCACAGTTTTATACAAGAACATTGACAAATGTTGGACCTGTTAACACAACTTATAATGTGGTAATTGATGTTCCTTTGACAGTAGGTATGAGTGTAAGTCCATCTCAAATAACATTCAATGAGGTGAAGCAAAAGGTTACATACTTTGTTGGTTTTATACCTGAAGATAAAGAGAATAGAGGTGATAACATGACTGCTCAAGGGTCTATCAAGTGGGTTTCTGGAAAATATTCTGTTAGTATTCCTATATCTGTTATCTTTGTGTGA 2277 0.4058 MTIKKMELITPKLLLGFIMVLSISQTSAHKYNYQEFTATNDELEDESSLLTYIVHVKKPSLDQSKESLHGWYHSLLPSTTKTQNQNRIIFSYQNIVDGFAVKLTPEEAKTLEEKDEVLSTRPEKILSLHTTHTPSFLGLQQSQELWKSSDLGKGIIIGILDTGIYPSHPSFSDEGMPSPPAKWKGHCEFTGERICNNKIIGARNFIKNSSLPFDDIGHGTHTASTAAGRPVQGANVFGNANGTATGMAPDAHLAIYKVCNINGCTESAILAGMDAAVEDGVDVLSLSLGIPSIPFFEDGIALGAFSAIQKGIFVSCSAANGGPAYGTLSNEAPWILTVGASTIDRKIEAVAKLGNGAEYLGESVFQPKDFASTLLPLVYAGALNTSDDSILYCSPTSMKNIDVKGKVVLCELGGLAARIAKGQAVKDAGGAAMILMNSENHAFNPIADVHVLPAVDVSFSAGSSIKKYINSTSTPTTTISFQGTVIGNPLAPQVASFSSRGPSKASPGILKPDIIGPGLNILAAWPSSLDNSTQPFNIISGTSMSCPHLSGIAALLKNSHPDWSPAAIKSAIMTTANKVNLQGKAILDQRLLPADVFATGAGHVNPLKANDPGLVYDIETNDYIPYLCGLNYTDKQVGLILQQEVKCSEVKSIPQAQLNYPSFSIRLGSTSQFYTRTLTNVGPVNTTYNVVIDVPLTVGMSVSPSQITFNEVKQKVTYFVGFIPEDKENRGDNMTAQGSIKWVSGKYSVSIPISVIFV 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03789 758 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 35 129 IPR037045 -
Vivi2g03789 758 Gene3D - 344 486 - -
Vivi2g03789 758 FunFam Subtilisin-like protease SBT1.5 154 372 - -
Vivi2g03789 758 CDD Peptidases_S8_3 128 577 IPR034197 -
Vivi2g03789 758 SUPERFAMILY Subtilisin-like 128 614 IPR036852 GO:0004252|GO:0006508
Vivi2g03789 758 Gene3D Peptidase S8/S53 domain 154 623 IPR036852 GO:0004252|GO:0006508
Vivi2g03789 758 Pfam Fibronectin type-III domain 657 755 IPR041469 -
Vivi2g03789 758 Pfam Peptidase inhibitor I9 51 129 IPR010259 -
Vivi2g03789 758 Pfam Subtilase family 152 579 IPR000209 GO:0006508|GO:0008236
Vivi2g03789 758 SUPERFAMILY PA domain 376 499 IPR046450 -
Vivi2g03789 758 Pfam PA domain 376 464 IPR003137 -
Vivi2g03789 758 Gene3D - 627 757 - -
Vivi2g03789 758 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 52 755 IPR045051 -
Vivi2g03789 758 FunFam subtilisin-like protease SBT1.5 344 486 - -
Vivi2g03789 758 CDD PA_subtilisin_like 350 470 - -
Vivi2g03789 758 ProSiteProfiles Serine proteases, subtilase domain profile. 136 610 - -
Vivi2g03789 758 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 157 168 IPR023827 -
Vivi2g03789 758 PRINTS Subtilisin serine protease family (S8) signature 152 171 IPR015500 -
Vivi2g03789 758 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Vivi2g03789 758 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03789 Vivi-Chr2 149061462 149063738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03789 51 755 Subtilisin-like Serine Gene Family AT5G67360 45.293 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03789 - - gmx:100799902 1087.79