Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03788 ATGGTAAGAACAAACTACACCATGCAACTTACATTGCTTGTTAGTCTCATTTTAGTTCTCTGCAGCATCAACCAAATTTCAGTATTTGCTGTAGAGGAAAGTCATGAACATGATCACAACTTAATGACATACATTGTTCATGTCAAAAAATCAGAAAATGTTGCTTCATTTCAATCAGAAGATTTGCATACTTGGTATCATTCATTCCTTCCACAAACTTTTGTTCACAAAGAGAGAATGGTTTTCACTTACAGCAATGTAGCCTCTGGATTCGCAGTCAAGTTGACACCAGAAGAAGCAAAAGATCTTCAAGAGAAAGGTGAAATTGTGTCGGCAAGACCTGAAAGGACACTTTCATTACACACAACTCACACTCCAACTTTCTTGGGGTTGAAACAAGGACAAGGATTATGGAGTGATGATAACCTCGGAAAAGGCGTCATAATTGGAGTCATAGATACAGGTATATATCCTTTTCACCCGTCATTCAACGACGAAGCAATGCCACCACCACCTGCAAAATGGAAAGGTCACTGTGAATTCACCGGTGGAGCAATTTGCAACAATAAGCTCATTGGTGCAAGAAACTTAGTCAAAGGCGCAATTCAAGAGCCTCCATTTGAGAATTTCTTCCACGGAACACACACTGCTGCAGAAGCCGCAGGAAGGTTCGTAGAAGATGCGAGCGTTTTTGGTAATGCTAAAGGTGTAGCAGCTGGTATGGCACCTAATGCTCACATAGCAATGTACAAAGTTTGTAATGACAAAGTTGGATGCCCTGAAAGTGCTATCTTAGCAGCGATGGATATAGCTATTGAAGATGGTGTAGATGTTCTTTCACTTTCACTTGGTTTAGGTTCTCTTCCATTCTTTGAAGACCCAATTGCAATTGGTGCATTTGCTGCTACCCAAAAAGGAGTTTTTGTTAGTTGCTCCGCAGCAAACTCTGGCCCTGGCTATAGCACTCTCTCAAATGAAGCTCCTTGGATCCTCACAGTAGGAGCAAGCACAATTGACAGAAAAATAGCAGCATCCGCAAAGCTAGGAAATGGTGAAGAATTTGAAGGTGAAACATTGTATCAACCTAAGGACTTTTCGCAACAATTATTGCCACTTGTGTATGGAGGTTCATATGGATATGGAAACTCAAGCCTGAATCAGTCGTTGTGTTTACCAGATTCCTTAAAGAACATTGATCTAAGAGGAAAAGTAGTGTTGTGTGATATAGGAGGAGGTGTTTCAAGTATTGTGAAGGGGCAAGAAGTTCTAAATTCAGGTGGTGTTGCCATGATCCTCGCAAACACAGAAGCCATTGGATTCAGCACTTTTGCCATTCCTCATGTTTTACCTGCTGTTGAAGTAAGTTACCTAGCTAGTTTGATAATCAAAGATTACATAAACAAAACCTACAATCCAACAGCAACCGTATCATTCAAAGGAACAATAATTGGTGATTCAAATGCTCCCTCTGTTGTTTCATTTTCTTCTAGAGGACCAAGTCAAGAAAGTCCAGGAATCTTAAAACCAGACATCATTGGACCAGGTGTCAACATTCTTGCCGCATGGGCTCTTTCTCTTGACAACAAACTCCCACCTTATAACATTGTTTCTGGTACTTCAATGTCTTGTCCTCATCTCAGCGGTATTGCTGCATTGATCAAAAGCTCTCACCCTGATTGGTCTCCGGCCGCTATAAAATCAGCAATCATGACAACGGCTAATACTCTCAACCTCGGTGGTTTACCTATAACAGATCAAAGACATTTACCTGCTGATGTTTTTGCTACTGGTGCAGGACATGTTAATCCTGTTAAAGCAAATGATCCTGGACTTGTTTATGATATTCAACCAGAAGATTATGTTCCTTATTTGTGTGGTTTGGATTATTCTGATGAAGAGATTGAAATTATTGTTCAGCAGAAAGTGAAGTGTTCTGGTGTGAAAAGTATAGCAGAAGCAGAACTGAATTATCCTTCTTTCTCTATTCTTATGGGTTCTGATTCGCAGTTTTATACCAGAACTTTGACTAATGTTGGGTTTGCAAATTCAACTTATAGAGCTGAACTTGATGTGCCTTTGGCTTTGGGAATGAGTGTGAATCCAAGTGAAATAACATTTACTGAGATCAATGAGAAGGTTAGTTTCTCTGTGGATTTTATACCTCAGATTAAGGAAAATAGAAAGAATCATACTTTTGCTCAGGGTTCTCTTACATGGGTTTCTGACAAACATGTGGTTAGGATCCCAATATCTGTGATTTTCAAGTGA 2268 0.3981 MVRTNYTMQLTLLVSLILVLCSINQISVFAVEESHEHDHNLMTYIVHVKKSENVASFQSEDLHTWYHSFLPQTFVHKERMVFTYSNVASGFAVKLTPEEAKDLQEKGEIVSARPERTLSLHTTHTPTFLGLKQGQGLWSDDNLGKGVIIGVIDTGIYPFHPSFNDEAMPPPPAKWKGHCEFTGGAICNNKLIGARNLVKGAIQEPPFENFFHGTHTAAEAAGRFVEDASVFGNAKGVAAGMAPNAHIAMYKVCNDKVGCPESAILAAMDIAIEDGVDVLSLSLGLGSLPFFEDPIAIGAFAATQKGVFVSCSAANSGPGYSTLSNEAPWILTVGASTIDRKIAASAKLGNGEEFEGETLYQPKDFSQQLLPLVYGGSYGYGNSSLNQSLCLPDSLKNIDLRGKVVLCDIGGGVSSIVKGQEVLNSGGVAMILANTEAIGFSTFAIPHVLPAVEVSYLASLIIKDYINKTYNPTATVSFKGTIIGDSNAPSVVSFSSRGPSQESPGILKPDIIGPGVNILAAWALSLDNKLPPYNIVSGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGLPITDQRHLPADVFATGAGHVNPVKANDPGLVYDIQPEDYVPYLCGLDYSDEEIEIIVQQKVKCSGVKSIAEAELNYPSFSILMGSDSQFYTRTLTNVGFANSTYRAELDVPLALGMSVNPSEITFTEINEKVSFSVDFIPQIKENRKNHTFAQGSLTWVSDKHVVRIPISVIFK 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03788 755 CDD PA_subtilisin_like 347 476 - -
Vivi2g03788 755 Gene3D - 624 754 - -
Vivi2g03788 755 Pfam PA domain 371 457 IPR003137 -
Vivi2g03788 755 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 149 160 IPR023827 -
Vivi2g03788 755 Pfam Peptidase inhibitor I9 43 121 IPR010259 -
Vivi2g03788 755 ProSiteProfiles Serine proteases, subtilase domain profile. 128 607 - -
Vivi2g03788 755 FunFam subtilisin-like protease SBT1.5 339 483 - -
Vivi2g03788 755 CDD Peptidases_S8_3 120 574 IPR034197 -
Vivi2g03788 755 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 44 752 IPR045051 -
Vivi2g03788 755 Pfam Subtilase family 144 577 IPR000209 GO:0006508|GO:0008236
Vivi2g03788 755 Gene3D Peptidase S8/S53 domain 146 620 IPR036852 GO:0004252|GO:0006508
Vivi2g03788 755 Gene3D - 339 483 - -
Vivi2g03788 755 Pfam Fibronectin type-III domain 654 752 IPR041469 -
Vivi2g03788 755 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Vivi2g03788 755 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Vivi2g03788 755 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Vivi2g03788 755 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 121 IPR037045 -
Vivi2g03788 755 SUPERFAMILY Subtilisin-like 120 611 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03788 Vivi-Chr2 149058443 149060782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03788 43 755 Subtilisin-like Serine Gene Family AT1G04110 44.021 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03788 - - gmx:100777577 1164.06