Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03773 ATGGATCAAATAACATCACATGGCCATTCACTTCCTCCACCTTTCCATACAGCAAGAGATCTTCATCTTCACCATCAACACCAACAGCAACAGCAACAACAGCAGCAGCAGCAGCAACACCATCAATTCCACACTTTACAGCAACAACATACCACAGATCAAGATGAACAAAGCGGAAGCAGCAGCGGCGGAGGACTCAACCTCACAAACCGTGAAGAAAACAGCAAGTTCAACGCCGATTTCAACGCGAAACTAGAATCCGGAGGAGGTTCCGGTGGCGATAACGATTCAATGACAAGAAGACCAAGAGGAAGACCAGCCGGATCCAAAAACAAACCAAAACCACCAATCATCATCACACGTGACAGCGCAAACGCCTTGAAAACTCACGTGATGGAAGTCGCAGACGGTTGCGACGTCGTTGAAAGTGTCAACAACTTCGCTAGACGCCGTCAGAGAGGCGTTTGCATCATGAGCGGAACCGGAACAGTCACCAACGTGACACTGAGGCAACCGGCTTCACCTGGAGCTGTAGTAACTCTTCACGGACGGTTCGAGATTTTGTCGCTGGCAGGATCGTTTCTTCCTCCGCCGGCTCCGCCTGCTGCTTCTGGTTTGACTATATATTTAGCCGGCGGACAAGGACAGGTTGTTGGCGGAAGTGTTGTGGGTGCTTTGATTGCTTCTGGACCTGTTGTTATCATGTCTGCTTCTTTTAGTAACGCTGCTTATGAGAGACTTCCTTTGGAAGATGATGATGGTTCTTCTTTGCAACAACTTCAAGGTGGTGGTGGTGGTTCTCCAAGTGGTGGTGGTGGTGGTGGTGGCGGTGGTGGAGTTCAACCTACACAGCTTTTAGGAGATTCAACTGCTCCACTTTTTCAAGCTATGCCTCCTCCTCCAAATTCTAATCTTAATCCTAATCTTCTCAATTCTGTTCAGATGCCTTCTGATAATTTCTGGCCAACCGGTCGATCTCCGTATTGA 987 0.4863 MDQITSHGHSLPPPFHTARDLHLHHQHQQQQQQQQQQQQHHQFHTLQQQHTTDQDEQSGSSSGGGLNLTNREENSKFNADFNAKLESGGGSGGDNDSMTRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDVVESVNNFARRRQRGVCIMSGTGTVTNVTLRQPASPGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGALIASGPVVIMSASFSNAAYERLPLEDDDGSSLQQLQGGGGGSPSGGGGGGGGGGVQPTQLLGDSTAPLFQAMPPPPNSNLNPNLLNSVQMPSDNFWPTGRSPY 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03773 328 Pfam Plants and Prokaryotes Conserved (PCC) domain 128 241 IPR005175 -
Vivi2g03773 328 Gene3D - 127 261 - -
Vivi2g03773 328 MobiDBLite consensus disorder prediction 306 328 - -
Vivi2g03773 328 FunFam AT-hook motif nuclear-localized protein 127 254 - -
Vivi2g03773 328 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 41 322 IPR014476 GO:0003680
Vivi2g03773 328 CDD DUF296 128 195 IPR005175 -
Vivi2g03773 328 MobiDBLite consensus disorder prediction 22 118 - -
Vivi2g03773 328 MobiDBLite consensus disorder prediction 252 328 - -
Vivi2g03773 328 ProSiteProfiles PPC domain profile profile. 124 261 IPR005175 -
Vivi2g03773 328 MobiDBLite consensus disorder prediction 27 76 - -
Vivi2g03773 328 SUPERFAMILY AF0104/ALDC/Ptd012-like 124 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03773 Vivi-Chr2 148966619 148972595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03773 1 328 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 54.023 1.88e-81 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03773 - - vvo:131652408 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03773 2 148966619 148972595 Vivi2g03773 2 148966619 148972595 ECH