Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03733 ATGAATGATCTAATGACAAAATCGTTCACCAGCTATGTTGATCTAAAAAAAGCAGCTATGAAAGATGAAGTTGATTTAGAAGCTGGTCTTCAAAAACAAGGTGTTAATGATGTTGAGTTAACAAGATCTTCGATAACCCATTTGGAAACTGATATGAATTTGTTCTTAGAAGAGGCAGAGAAAGTAAGAACAGAAATGGGTGAAATTCGTGATGTTCTAACGAAGCTTCAACAAGCTAATGAAGAGAGCAAGTCACTTCACAAAACTGATGCTTTGAAATCGTTGAGAGAAAGAATCAATACTGATATTGTAACTGTTTTGAAGAAAGCAAGATGTATTAGGACTCAATTAGAAGAAATGGATCGTGCTAATGATGCTAATAGAAGACTCTCCGGACTTAAAGATGGTTCACCAGCAATTTATCGAACAAGAATTGCGGTTACCAATGGATTGCGTAAGAAGCTCAAGGAGCTCATGATGGAGTTTCAGGGACTGAGGCAGAGAATGATGAGTGAATACAAAGAGACAGTAGGGAGGAGATACTATACAGTGACAGGTGAACATGCTGATGAAGAGGTGATTGATAAGATAATATCAAATGGAGATGATGAAAGTTTTCTAGGAAAGGCAATACAAGAGCATGGAAGAGGAAAGGTTCTTGAAACTGTGGTTGAGATACAAGACAGACACGATGCTGCGAAAGAGATTGAGAAGAGTTTGTTGGAACTCCATCAAGTGTTTTTGGACATGGCTGTTATGGTTGAAGCACAAGGTGAGAAAATGGATGATATAGAACATCATGTTCTTCATTCTTCTCATTATGTTAAAGATGGTACAAAGAATCTTCATAGTGCTAAGCAATATCAGAAAAGTGGGAGGAAGTGGATGTGCATTGGGATTATACTTTTGCTTATTCTGATTCTGGTTATTGTTATTCCCATTGTCACCAGTTTGAGCAGTTCTTGA 966 0.3737 MNDLMTKSFTSYVDLKKAAMKDEVDLEAGLQKQGVNDVELTRSSITHLETDMNLFLEEAEKVRTEMGEIRDVLTKLQQANEESKSLHKTDALKSLRERINTDIVTVLKKARCIRTQLEEMDRANDANRRLSGLKDGSPAIYRTRIAVTNGLRKKLKELMMEFQGLRQRMMSEYKETVGRRYYTVTGEHADEEVIDKIISNGDDESFLGKAIQEHGRGKVLETVVEIQDRHDAAKEIEKSLLELHQVFLDMAVMVEAQGEKMDDIEHHVLHSSHYVKDGTKNLHSAKQYQKSGRKWMCIGIILLLILILVIVIPIVTSLSSS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03733 321 Pfam SNARE domain 260 311 IPR000727 -
Vivi2g03733 321 Gene3D - 219 318 - -
Vivi2g03733 321 SMART SynN_4 47 174 IPR006011 GO:0016020
Vivi2g03733 321 Gene3D - 52 180 - -
Vivi2g03733 321 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 49 180 - -
Vivi2g03733 321 CDD SynN 55 199 IPR006011 GO:0016020
Vivi2g03733 321 Coils Coil 148 168 - -
Vivi2g03733 321 ProSitePatterns Syntaxin / epimorphin family signature. 229 269 IPR006012 GO:0005484|GO:0006886|GO:0016020
Vivi2g03733 321 SMART tSNARE_6 218 285 IPR000727 -
Vivi2g03733 321 SUPERFAMILY t-snare proteins 50 278 IPR010989 GO:0016020|GO:0016192
Vivi2g03733 321 FunFam Syntaxin 132 216 316 - -
Vivi2g03733 321 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 223 285 IPR000727 -
Vivi2g03733 321 Pfam Syntaxin 55 258 IPR006011 GO:0016020
Vivi2g03733 321 CDD SNARE_syntaxin1-like 222 282 - -
Vivi2g03733 321 PANTHER SYNTAXIN 64 307 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03733 Vivi-Chr2 147847643 147849284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03733 1 321 SNARE and Associated Proteins AT1G08560 63.975 5.45e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03733 K08486 - gmx:100816016 489.189