Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03732 ATGGCCGAAGAAGCCAAAGCCAAAGGCAACGCTGCATTTTCTTCCGGCGACTTTCCAACCGCCATCCGCCACTTCTCTGAAGCCATCGATCTCGCCCCCGACAACCACGTCCTCTATTCCAACCGATCCGCAGCTTATGCTTCTCTCCAGAAATACACCGAAGCTTTAGCCGACGCCAAGAAAACCGTCGAGCTCAAACCCAACTGGGTGAAAGGCTACAGCCGGCTCGGAGCCGCTCATCTCGGCTTATCTCAATTCGATGACGCTATTGCTTCGTACAAGAAAGGTCTTGATTTTGACCCTACTAATGAGCCGCTTAAATCAGGGTTAGCCGATGCGGAGAAAGCCGCGGCTTCGGCTGCGGCTAGGTCACGTTCTGCGCCGGCTAATCCCTTTGGAGATGCTTTCAGCGGTCCTGAGATGTGGGCTAAGCTGACGGCTGATCCTACAACTAGGGTTTTTCTTCAACAACCTGATTTTGTGAAGATGATGCAAGACATTCAGAAGAATCCGAATAATCTGAATTTGTATTTGAAGGATCAGAGAGTTATGCAAGCTTTTGGGGTTTTGCTTAATGTTAAGCTTGGAACTGCTGGTGATGATGTGGATATGCCTGATACGCCTTCTTCCTCTTCTTCTGAGAGGAAGAGAGCAGCTGAAGCCGAGCCTCCTAAGCAGCCTGAGCCGGAGCCTGAGCCCATGGAAGAGGCTGATGAGGAGAAGGAAGCAAAGCAGAGAAAGGCTGAGGCACAGAAGGAAAAGGAGGCTGGTAATGCGGCTTACAAAAAGAAGGATTTTGATACCGCGATTCATCATTACTCAAAAGCTTTGGAATTGGATGATGAAGATATATCGTTCCTCACCAACCGTGCTGCTGTGTATTTGGAGATGGGAAAGTACGAGGATTGCATTGAAGATTGTGACCAGGCAGTTGAAAGAGGGCGAGAGCTACGATCAGACTACAAGATGGTAGCAAGAGCTTTGACAAGGAAGGGGACTGCTATGGGCAAAACGGCAAAATGCTCCAAAGATTATGAACCTGTCATTGAGACTTTCCAAAAAGCACTTACAGAGCACCGCAACCCAGACACCCTAAAGAAACTTAATGAAGCTGAAAAGGCTAAGAAAGAATTAGAACAACAAGAATACTTCGATCCAAATTTGGCTGACGAGGAGCGGGAAAAAGGGAATGAATTCTTTAAGCAGCAGAAGTATCCTGAAGCTATTAAGCATTACACCGAGTCTCTAAGAAGAAACCCAAAAGATCCTAGGGCTTATAGTAACAGAGCTGCATGCTACACCAAACTGGGGGCAATGCCTGAAGGTTTAAAGGATGCAGAGAAGTGCATTGAGCTTGATCCAACCTTCACAAAGGGTTATACCAGGAAAGGTGCGGTTCAGTTTTTCATGAAAGAATATGAAAAGGCTTTGGAAACATATAAGGAGGGGTTGAAACATGATGCCAACAATCAGGAGTTGCTTGATGGCATTTCAAGGTGTGTACAACAAATTAACAGAGCCAGCCGTGGAGATTTGAGTCCTGAAGAGTTGAAGGATAGACAGGCCAAGGCAATGTCAGATCCAGAGATACAGAATATTCTTCAAGACCCTGTTATGCGACAGGTATTGGTTGACTTCCAGGAAAATCCCAAGGCTGCACAGGAACATACCAAGAACCCGGGCGTGATGGACAAGATCCAGAAGCTGATCAGTGCTGGAATTGTCCAGATGAGGTAA 1737 0.4692 MAEEAKAKGNAAFSSGDFPTAIRHFSEAIDLAPDNHVLYSNRSAAYASLQKYTEALADAKKTVELKPNWVKGYSRLGAAHLGLSQFDDAIASYKKGLDFDPTNEPLKSGLADAEKAAASAAARSRSAPANPFGDAFSGPEMWAKLTADPTTRVFLQQPDFVKMMQDIQKNPNNLNLYLKDQRVMQAFGVLLNVKLGTAGDDVDMPDTPSSSSSERKRAAEAEPPKQPEPEPEPMEEADEEKEAKQRKAEAQKEKEAGNAAYKKKDFDTAIHHYSKALELDDEDISFLTNRAAVYLEMGKYEDCIEDCDQAVERGRELRSDYKMVARALTRKGTAMGKTAKCSKDYEPVIETFQKALTEHRNPDTLKKLNEAEKAKKELEQQEYFDPNLADEEREKGNEFFKQQKYPEAIKHYTESLRRNPKDPRAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFTKGYTRKGAVQFFMKEYEKALETYKEGLKHDANNQELLDGISRCVQQINRASRGDLSPEELKDRQAKAMSDPEIQNILQDPVMRQVLVDFQENPKAAQEHTKNPGVMDKIQKLISAGIVQMR 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03732 578 SUPERFAMILY TPR-like 8 503 IPR011990 GO:0005515
Vivi2g03732 578 ProSiteProfiles TPR repeat profile. 250 283 IPR019734 GO:0005515
Vivi2g03732 578 Pfam STI1 domain 139 192 IPR041243 -
Vivi2g03732 578 Pfam STI1 domain 519 570 IPR041243 -
Vivi2g03732 578 FunFam Putative stress-induced-phosphoprotein 1 128 196 - -
Vivi2g03732 578 Coils Coil 234 260 - -
Vivi2g03732 578 Gene3D - 128 195 - -
Vivi2g03732 578 FunFam Stress-induced phosphoprotein 1 247 381 - -
Vivi2g03732 578 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Vivi2g03732 578 Pfam Tetratricopeptide repeat 71 103 IPR019734 GO:0005515
Vivi2g03732 578 Gene3D Tetratricopeptide repeat domain 1 116 IPR011990 GO:0005515
Vivi2g03732 578 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Vivi2g03732 578 MobiDBLite consensus disorder prediction 213 231 - -
Vivi2g03732 578 MobiDBLite consensus disorder prediction 238 259 - -
Vivi2g03732 578 FunFam Stress-induced phosphoprotein 1 1 116 - -
Vivi2g03732 578 Gene3D Tetratricopeptide repeat domain 247 383 IPR011990 GO:0005515
Vivi2g03732 578 Gene3D Tetratricopeptide repeat domain 388 507 IPR011990 GO:0005515
Vivi2g03732 578 SMART tpr_5 457 490 IPR019734 GO:0005515
Vivi2g03732 578 SMART tpr_5 2 35 IPR019734 GO:0005515
Vivi2g03732 578 SMART tpr_5 284 317 IPR019734 GO:0005515
Vivi2g03732 578 SMART tpr_5 36 69 IPR019734 GO:0005515
Vivi2g03732 578 SMART tpr_5 70 103 IPR019734 GO:0005515
Vivi2g03732 578 SMART tpr_5 389 422 IPR019734 GO:0005515
Vivi2g03732 578 SMART tpr_5 325 362 IPR019734 GO:0005515
Vivi2g03732 578 SMART tpr_5 250 283 IPR019734 GO:0005515
Vivi2g03732 578 SMART tpr_5 423 456 IPR019734 GO:0005515
Vivi2g03732 578 PANTHER TPR REPEAT CONTAINING PROTEIN 2 550 - -
Vivi2g03732 578 ProSiteProfiles TPR repeat profile. 457 490 IPR019734 GO:0005515
Vivi2g03732 578 ProSiteProfiles TPR repeat profile. 423 456 IPR019734 GO:0005515
Vivi2g03732 578 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Vivi2g03732 578 FunFam Stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing) 510 578 - -
Vivi2g03732 578 Coils Coil 361 381 - -
Vivi2g03732 578 Gene3D - 508 578 - -
Vivi2g03732 578 ProSiteProfiles TPR repeat profile. 389 422 IPR019734 GO:0005515
Vivi2g03732 578 Pfam TPR repeat 396 437 - -
Vivi2g03732 578 Pfam TPR repeat 257 298 - -
Vivi2g03732 578 SMART CBM 527 566 IPR006636 -
Vivi2g03732 578 SMART CBM 138 177 IPR006636 -
Vivi2g03732 578 MobiDBLite consensus disorder prediction 197 259 - -
Vivi2g03732 578 Pfam Tetratricopeptide repeat 7 67 - -
Vivi2g03732 578 FunFam hsp70-Hsp90 organizing protein 3-like 388 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03732 Vivi-Chr2 147837878 147841233 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03732 388 484 U-box Gene Family AT3G07370 27.835 1.48e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03732 K09553 - gmx:100816776 891.723