Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03729 ATGAACAATTTCTCGCACGTTCCTCCTGGATTTCGATTCCATCCCACTGATGAAGAACTTGTTGATCACTACCTTCGGAAAAAGATAGCTTCAAAAAGAATTGATCTTGATATCATTAAAGATGTTGATCTCTATAAAATCGAGCCATGGGATCTACAAGAGTTATGCAAAATAGGAAGTGATGAAGAAACTGAATGGTTTTTCTTCAGTCATAAAGACAAGAAATATCCAACTAGTAGTCGTACAAATAGAGCTACAAAAGCAGGATTCTGGAAAGCCACAGGAAGAGACAAAGCAATATATTCTAACAATATTTGTCTGATTGGAATGAGAAAGACTCTTGTTTTCTATAAAGGAAGAGCTCCTAATGGACAGAAATCTGATTGGATCATGCATGAATATCGCTTAGAAACTAATGAAAATGGAACTACACCTCAGGAAGAAGGATGGGCTGTGTGTAAAGTGTTCAAGAAAAGAATAGCTACAACAATGAGGAGGATGGATGAGTCACCATGTGGATATGATGATCAAGTTTCATTCATGCAAGAGCTTGAAACACCAAACCGAGTATTTTCTTCTCATTCTTATGCATCATACCAACAACAACATCAACAACAACAACACTATCCTTGCAAACAAGAGTTGAATCAAATGCAATACAATATATCCATTAATGATGCTAACAATTTCCTCCAACTTCCACCACTAGAAAGCCCTAAAATACCTAATTTGCAGTGCTCATCATCATCACATTCAATAACTCATCAAGAACAACAACAATATTATAGCCAGCACCAGCAACAAAGTATGCAAATGCTTTATAGTGGTAACAATGATTTACAAGCAGTAGTGGAGCAATCAAAGGATTGGAGAGTATTTGACAAACATGTTGCTTCTCAGCTAAGTCATGATCAAGAAGCTTCCAAGGAAACAGTAACCAGTTATTGCAATATTGTGGCTGAACAAATTGCTTTGCTAGCAAATGAGTCTAAAAAATCTGAAACTCATGACCATGAATATGCTACTTCAACTTCCAACTCCAGTTGCCAGATTGATACATGGAAGTGA 1068 0.3652 MNNFSHVPPGFRFHPTDEELVDHYLRKKIASKRIDLDIIKDVDLYKIEPWDLQELCKIGSDEETEWFFFSHKDKKYPTSSRTNRATKAGFWKATGRDKAIYSNNICLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTTPQEEGWAVCKVFKKRIATTMRRMDESPCGYDDQVSFMQELETPNRVFSSHSYASYQQQHQQQQHYPCKQELNQMQYNISINDANNFLQLPPLESPKIPNLQCSSSSHSITHQEQQQYYSQHQQQSMQMLYSGNNDLQAVVEQSKDWRVFDKHVASQLSHDQEASKETVTSYCNIVAEQIALLANESKKSETHDHEYATSTSNSSCQIDTWK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03729 355 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Vivi2g03729 355 FunFam Nac domain-containing protein 86 16 161 - -
Vivi2g03729 355 MobiDBLite consensus disorder prediction 335 355 - -
Vivi2g03729 355 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Vivi2g03729 355 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 266 - -
Vivi2g03729 355 Pfam No apical meristem (NAM) protein 8 136 IPR003441 GO:0003677|GO:0006355
Vivi2g03729 355 MobiDBLite consensus disorder prediction 340 355 - -
Vivi2g03729 355 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03729 Vivi-Chr2 147752113 147754942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03729 1 352 NAC Transcription Factor Family AT1G62700 54.126 1.95e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi2g03729 NAM 9.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03729 - - tcc:18606319 432.95