Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03699 ATGGCGGAACTTAACGAAGAACAAGACAAGAGAGAACTCTACGCAGTTTTGAATTTATCCCCCGAAGCTTCCGATGAAGAAATTCGCAAAGCATATCGTCAATGGGCGCAGCTCTATCACCCCGATAAGTTCCAATCTCCTAACTTAAAAGATGCTGCTACGGAGAATTTCCAACGAGTGTGTGAAGCGTATGAGATTTTGTCAGATCCAATTAAAAGGCAAGTTTATGATATCTATGGTATGGAAGGATTGAAATCTGGTTTGGAACTTGGTCCGAGTTTGGAGAAAGTTGAAGAGATTAAAGCTGAATTGGATAGAATGAAGAGAATGAGGGAACTGGAAAAGAAAGCGGCGCGGATTCAATCTTCCGGGACGATTATGTCCAATATATCTTTGCCACAGTATCTAGTTGGTGAAGGCCTCTTCCAAGGAATGGCAATGACAAGTGAAATTCAGTCTGAGTTGTCAAAACGAAGTGTTGCCGTGATTGGCGGCAATTTAGCAGTTGATGGACATGTAGGTGGTGGAGGTGCTAATGCTGTATTAAGTCATCAACTTTCAGAAGCTTCGTCAATAGACTTTATGGCTTCAGCTGGTTTACGTTCGCTACTTGGGGTTCAGACATCTCGGCATATATCCTCACACTCATCTGCAACAGCAGGCTTAACACTGTCTTTGAAAGATGGTTCATTGAATCTTTCTAATGCATGGACCCGCCAACTGTCAGATACAACAAACGGAAGTATACAACTCTTGTTGGGATCACATTCATCTGTAGCCGTAGGGTGGCAGAAAAAAGATAAGAGAAGGACTGCTTCTGGAGAAGTGAAGTTTGGCACAGGTTCTTTTGAGACATCGGTTCATTATACTCATCGATTTTCTTCTAAATCTCATGGCTGCATTGCAGGAAGAGTTGGGAGTTCTTCCATTGAGATGGAAGTTGGTGGTGGAAGGAAGTTATCAAAATTCAGTACTGTGCGCTGGTTGTATGTAATTGGAATTCAGGGTATTTCCTGGAGATTTGAACTCTATCGTGGGGGTCAGAAGCTGGTTGTTCCTATTTTGCTGACGGATTATTTGAATCCTGTGTTTGCTACTGGAGCATTTGTTATTCCAGCATCTTTTTACTTAGTTCTGAAGAAATTTTTCATTAAACCTTATTACCTTAAAAGGAGTAAGCAGAAGGCTCTGGAGAAGGAGGGGAAAAGTTCTGCTCAGGTTCAAGAAGGAAGGGCTGCAGCGGAAAAAGCTCAGAAATTACAACAAAATGTGGCTAATAGGAAAAGAAACAAGCAATTAGAAATGGATGGACTGGTTATTATGAAAGCGCTATATGGAAGTGATACAATTCTAAACAACTTGGATTCTTCAAATGAAACCAGTTTTGAATCTACTTCAGGAGTCATCGATGTTACAACGCCTCTAAACTTTCTAGTTAATGATTCCAGTCAACTTAAGCTTCACGAAGGTGTAAAGAAATCAGGAATCATGGGTTTCTGTGATCCCTGTCCAGGAGAGCACAAAATGTTATATGTAGAATATTCTTATGCCAGCAATCAACACAGGGTCTTGGTTGATGACTATGAAGAATTACTGATACCCCAGGGCATCCACAGGATATAA 1623 0.411 MAELNEEQDKRELYAVLNLSPEASDEEIRKAYRQWAQLYHPDKFQSPNLKDAATENFQRVCEAYEILSDPIKRQVYDIYGMEGLKSGLELGPSLEKVEEIKAELDRMKRMRELEKKAARIQSSGTIMSNISLPQYLVGEGLFQGMAMTSEIQSELSKRSVAVIGGNLAVDGHVGGGGANAVLSHQLSEASSIDFMASAGLRSLLGVQTSRHISSHSSATAGLTLSLKDGSLNLSNAWTRQLSDTTNGSIQLLLGSHSSVAVGWQKKDKRRTASGEVKFGTGSFETSVHYTHRFSSKSHGCIAGRVGSSSIEMEVGGGRKLSKFSTVRWLYVIGIQGISWRFELYRGGQKLVVPILLTDYLNPVFATGAFVIPASFYLVLKKFFIKPYYLKRSKQKALEKEGKSSAQVQEGRAAAEKAQKLQQNVANRKRNKQLEMDGLVIMKALYGSDTILNNLDSSNETSFESTSGVIDVTTPLNFLVNDSSQLKLHEGVKKSGIMGFCDPCPGEHKMLYVEYSYASNQHRVLVDDYEELLIPQGIHRI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03699 540 Coils Coil 97 117 - -
Vivi2g03699 540 Gene3D DnaJ domain 2 91 IPR036869 -
Vivi2g03699 540 PRINTS DnaJ domain signature 14 32 IPR001623 -
Vivi2g03699 540 PRINTS DnaJ domain signature 72 91 IPR001623 -
Vivi2g03699 540 PRINTS DnaJ domain signature 32 47 IPR001623 -
Vivi2g03699 540 PRINTS DnaJ domain signature 52 72 IPR001623 -
Vivi2g03699 540 SMART dnaj_3 11 72 IPR001623 -
Vivi2g03699 540 PANTHER CHAPERONE PROTEIN DNAJ 13 1 540 IPR042162 -
Vivi2g03699 540 ProSiteProfiles dnaJ domain profile. 12 80 IPR001623 -
Vivi2g03699 540 Pfam DnaJ-like protein C11, C-terminal 386 534 IPR024586 -
Vivi2g03699 540 CDD DnaJ 12 69 IPR001623 -
Vivi2g03699 540 Pfam DnaJ domain 13 77 IPR001623 -
Vivi2g03699 540 SUPERFAMILY Chaperone J-domain 9 90 IPR036869 -
Vivi2g03699 540 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03699 Vivi-Chr2 147102768 147111112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03699 9 79 C2H2 Transcription Factor Family AT1G74250 46.575 1.31e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03699 K09531 - gmx:100817782 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03699 2 147102768 147111112 Vivi2g03699 2 147102768 147111112 ECH