Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03696 ATGGCTACTAATTCTCCATCCCCTATTCTTAAATGTGATGAGTCTAAATGGACTTCTCAGCTCATTTCATCTTATAATGTGAGACTTGTTCTCACTGTGGACTCCAAGGGTTGCAGAAATTTTACAAGCGTTCAAGAAGCCGTTAATGCTGTTCCAGATTCAAGCACTCAGATCACTCTTATCATATTGGAATCTGGGATATACAGAGAAAAGGTAAAGGTTAATGACACCAAGACTAATTTGATAATAGAAGGTAAAGGCTATCTCAACACATTCATTGAGTGGGATGACAATGGTAATAGGACAAGAACTTTCATGAGTTACTCTTTTGGTGTCTTTGCAGCAAAGTTCACAGCATACAATATAGGCTACAATGTTGATGCTGATAAAGAAGATGGTGGTACTAGTACATCCAGAAAAGGTGCTAAAGTTAACAACGTGCTTAATAAGGGCACTAAGAAAGAAGCTCTTGATGCTGCACAGTTTAAAAACTTGCGAAGCAAGTTAGGAGTCTGCATCTTTGAGGAACCATAA 534 0.382 MATNSPSPILKCDESKWTSQLISSYNVRLVLTVDSKGCRNFTSVQEAVNAVPDSSTQITLIILESGIYREKVKVNDTKTNLIIEGKGYLNTFIEWDDNGNRTRTFMSYSFGVFAAKFTAYNIGYNVDADKEDGGTSTSRKGAKVNNVLNKGTKKEALDAAQFKNLRSKLGVCIFEEP 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03696 177 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 132 - -
Vivi2g03696 177 Gene3D - 25 174 IPR012334 -
Vivi2g03696 177 Pfam Pectinesterase 32 130 IPR000070 GO:0030599|GO:0042545
Vivi2g03696 177 SUPERFAMILY Pectin lyase-like 27 125 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03696 Vivi-Chr2 147039435 147044847 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03696 31 124 Carbohydrate Esterase AT1G05310 41.053 1.03e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03696 - - vvo:131650260 355.525