Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03671 ATGGAACAGGTTCATGTCCCTATAGAAAACGAAATTCAACTAACCACTTCCATTTCTTCTTCTTCCGCCATTGAAGATAATAATAATAACAAAACCAAACCCAAAGGTGATGGAAAACACCCACTATACCGTGGAGTTCGAATGCGTCATTGGGGAAAATGGGTTTCGGAAATTCGAGAGCCCAAGAAAAAATCCAGAATCTGGCTCGGTACTTTCCCAACACCGGAAATGGCGGCCCGAGCCCACGACGTTGCGGCCCAAGCCATTAAAGGTAGTTCGGCTTACCTCAATTTCCCTGAATTAGCCGACCAACTTCCTCGCCCGGCTACTAATTCTCCTAAGGATATTCAAGCCGCCGCCGCTAAAGCAGCTTCTATGGGTTATCTCCATGAAGCCCAGGCCCAGGCCCATGACATGAAAGACGAGGATGACATGTTTTATGACCTCCCTGATCTTTTACTCGACTCAAATAAGAATTCAAGTGAGCTTCGTTATTCTTCTATCTCTGAGCCGTGGCTCGTGGCTGGAGCTGAACATCCAAGCTCCGGCTTTGGGCTGGATGAGCCTTTCCCGTGGGAGCCATACTAA 588 0.4796 MEQVHVPIENEIQLTTSISSSSAIEDNNNNKTKPKGDGKHPLYRGVRMRHWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAAQAIKGSSAYLNFPELADQLPRPATNSPKDIQAAAAKAASMGYLHEAQAQAHDMKDEDDMFYDLPDLLLDSNKNSSELRYSSISEPWLVAGAEHPSSGFGLDEPFPWEPY 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03671 195 MobiDBLite consensus disorder prediction 9 29 - -
Vivi2g03671 195 CDD AP2 41 101 IPR001471 GO:0003700|GO:0006355
Vivi2g03671 195 MobiDBLite consensus disorder prediction 1 43 - -
Vivi2g03671 195 FunFam Ethylene-responsive transcription factor 2 41 100 - -
Vivi2g03671 195 Pfam AP2 domain 41 91 IPR001471 GO:0003700|GO:0006355
Vivi2g03671 195 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Vivi2g03671 195 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 26 152 - -
Vivi2g03671 195 SUPERFAMILY DNA-binding domain 42 100 IPR016177 GO:0003677
Vivi2g03671 195 Gene3D AP2/ERF domain 42 100 IPR036955 GO:0003700|GO:0006355
Vivi2g03671 195 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Vivi2g03671 195 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Vivi2g03671 195 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03671 Vivi-Chr2 146592667 146594755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03671 31 190 AP2-EREBP Transcription Factor Family AT2G44940 46.667 4.62e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Vivi2g03671 AP2 8.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03671 - - cam:101496929 276.559