Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03658 ATGTGCCGGCAAAATTCTCCGGTGCATAATTCCGCTGAAGATGAAATTGCAGCTGATGAGAGTCTTTTGATTTATTGCAAGCCTGTTGAATATTACAATATTATCTACCGTCGTTTTCTTCACAATCCTAGTTTTCGGAAAAAATGTTTGAGCTATAAAATCAAAGCAAGGCGCAATAGGAGGTCGAGAACAGGAATTGTGATTTTCAACTATAGGGACTGTTACAACATGCTTCGAAAGACTGAAGTGACTGAAGACTTTTCTTGTCCATTTTGCTTAATGCAGTGTGCGAGCTCTAAGGGCTTGCGTTTACATCTTTGTGCATCACATGATCTGTTCAACTTTGAGTTCTGGGTTACCGAGGATTACCAAGCAGTGAACGTCTCTGTGAAAATTGACATATTGAGATCTGAGAATGTTGCCGATGGAGTAACTCCACAATCAGAAACCTTCTTCTTCTGTTCAAGACCTCTAAAGCGCCGTAGAGAAAAAGACTCTGTTCAAAATGAGAAGCACGCCAATGTAAAGTTCCTGAAGTTGGATTCACCAGAAGGCACACCGAATGGGATACTGCAGAAAGACAATGGTGTCCTGTCCTACAAAGGGGAGAATATGTCTAGAGCATCTCACACTTTGCAAAATGAAGGAAATGGCGGGGTAAAATTTGGTCCTGATCATCCTAGCACCACAAATCACCTGGAACATGTAGATTCTAGTGTTAACAATACAGGTGTTTCAATTGCCATGCCCCAATCTTCTGAGGACCCTGAATGTGGGAAATCAATACATAGAAGTGATCCTGCTCTGCCAACTAAAGCAAAGAAATTAAATGCGGACCGTTCAGACTCAAAGAATCGTATCCTCCTGCAGAAGAGGCAGTTCTTTCACTCGCATAGAGTTCAGCCCATGGCACCAGAACAAGTGGTATCAGATCGGGATAGTGAAGATGAAGTGGATGATGCAGTTGCTAACCTGGAAGATAGAAGGATGCTTGATGATTTTGTAGATGTTTCCAAAGATGAAAAGGAGTTCATGAATCTTTGGAACTCTTTTATGAAGAAACAAAGGGTACTGGCTGATGGTCATATGCCGTGGGCTTGTGAGGCATTTTCCAAGCATCATGCAGAAGAGCTGATCTCTTCCCGAGCTTTACATTGGTGTTGGTCATTATTCATGATCAAACTTTGGAATCATGGTCTTCTTGATGCGTGCACAATGAACAACTGCAGTTTAATATTAGAGCGCTTCAAAATCGGGGGATCCGATACTGTCACAAATTGA 1281 0.4192 MCRQNSPVHNSAEDEIAADESLLIYCKPVEYYNIIYRRFLHNPSFRKKCLSYKIKARRNRRSRTGIVIFNYRDCYNMLRKTEVTEDFSCPFCLMQCASSKGLRLHLCASHDLFNFEFWVTEDYQAVNVSVKIDILRSENVADGVTPQSETFFFCSRPLKRRREKDSVQNEKHANVKFLKLDSPEGTPNGILQKDNGVLSYKGENMSRASHTLQNEGNGGVKFGPDHPSTTNHLEHVDSSVNNTGVSIAMPQSSEDPECGKSIHRSDPALPTKAKKLNADRSDSKNRILLQKRQFFHSHRVQPMAPEQVVSDRDSEDEVDDAVANLEDRRMLDDFVDVSKDEKEFMNLWNSFMKKQRVLADGHMPWACEAFSKHHAEELISSRALHWCWSLFMIKLWNHGLLDACTMNNCSLILERFKIGGSDTVTN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03658 426 PANTHER POLYCOMB GROUP PROTEIN 9 61 - -
Vivi2g03658 426 Pfam VEFS-Box of polycomb protein 276 410 IPR019135 -
Vivi2g03658 426 CDD ZnB-Zn_EMF2-like 13 134 - -
Vivi2g03658 426 MobiDBLite consensus disorder prediction 251 279 - -
Vivi2g03658 426 CDD VEFS-box_EMF2-like 289 415 - -
Vivi2g03658 426 MobiDBLite consensus disorder prediction 257 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03658 Vivi-Chr2 146189041 146196315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03658 1 68 C2H2 Transcription Factor Family AT5G51230 51.471 4.87e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03658 - - gmx:100807112 672.159