Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03645 ATGACAACATCAATGCCAGTCTGTAATGAACAATCTGAAGAAGAGTTTGGGAAGCAGATGATGGAACTGGGAGACTCTAGTGTCGTTGCTCGGCCTAAGTTTAAGTGCCGTAAAGTTTGTGCTGTTCGTGATTATCCAGAAGGATGTGGACCGTTTGGCAATGCTGATGGTACGAGCGTTGAGGATAAGAATAGTGAAGATTTGGAGTGTGATGATGTTACTCCTGACCATCCAGATGATTCTCAACATTCTGAGCATGAAAATAATTTGGTTGTTACAGAGACTATTGAATTAATAAGTGACTGTAGTTTGAAGAAGGAAGATCCTGGGAATTTGTCTGATCAAGTGGCGTTGGTGGGCATGGAAACTTTGGATGCAGAATTTGCTACAGAAAGCTCTAGTTTGAAGAAGGAAGTTCCTGTGGAAAATTTGGGTGCTGAATTCGCTACAGAAAGCTCTAGTTTGAAGAAGGAAGTTCCTGTTGAAACTTTGAGTGCCCAATTTGCTACTGAAAGCTCTAGTTTGAAGAAGGAAGTTCCTGTGGAAACTTTGGGTGCAGAATTTGCTACAGAAAGCTCTAGTTTGAAAAAGGAAGTTCCTGTGGTTTCATCTCATCTAGTGGATGGACCTATTTTGGATAATGACGAACATGCAAATGTGGTGTTGGCGGACATGGAAACTTTGGGCGGGGAATCTGCAGCAGAAATCAGTAGTTTGAAGAAGGAAAATCCAATTGTTTCATCCCATAAGGTGGATGGGTCTATTTTGGCTAATGATGAACCAGATAAAGTGATATTGGTGGGCACGGAAACTTCGGATATGGAATTTGCAATACAAGACTCTGTAAAACAAGAGTCCTTATATATGTCGAAGGCATTGTCTCCAGTTGGTGAGTCAGCTATGTCTGATGACTCAAAATCCTCGTCATCCAATATCAATATAGGTGGTTCCGGGGCTTGTATGGAGGAGGCTGTAACTAGAAGGTATCCTCCTCGTAGAAATTTTGCAGCGGTCAGAGACTTTCCACGATTATGTGGGCGCAATGCTCCCCGTCTTACTAAGGATGAGCGTTTAAAGGAGCTCTCTTCTCTGAATGAAAAGGGAACAGGTCAACAAAACTTGACTGTAGATGCCAGTCTGTTGAAAGAAGTTGCAGACACTGATGCAAAAGAAGTGGAAAATAACAAGAGAAAGCCCGGTAACATCGTTCAAGCTGGCTCTGAAGAAGAGAATAATGCTACGCAGAGAGTCAAGAAGCTGGATGTATTTGAACCATCTTCTGAGATGAGACTGGCACTGGATAACACAAGAGAAAAGAGCACTAAACTTCCCGAAAAACGCAATCACCATCAGGTTAACATAAATTCCAGGGCAGTGGCTAAAGAGGAAGTTATGAATACTATACAGGTCGAGGGAACATCAGAGCTAGATGCTTACCGCCCAGAAGTCCAAAGTCCTGAGAAAAAACCTTTGGCTATATCAAGAGAGGAAGTAGTGCTAGGTTTGAAGTCTAAATCAGAATGTCCTTGGACATCTGGAGTTAGTAGTTCTTCCAAATCTAAACCAACATCAATAGGTGGTACAGAAGAAAAGAAGGCAAAGAAAGTTGATTTTTATGCCCAGCTAGACAGGTCTAAAACTGCTGTCAAGACGAAAGATATACGGAGTCATTCTGGGCATGAGCCATTGAAAAAGAAAAAACTAAACTCCCCTTCTGATGACATGGGTCAACTAGTAGGACGGGAGAAGAATTCTCTAGACCCTAATGAAAATAACAAAGTCTTTAAAAGTGTCACAAAATCACATGGTTCAAGTGTCCCAAAATCTTCGAGTGTCCCAAGATCAAGTGTTATGGTTCCTCCTATTGGCTGTAGTAATTTCAGTGGTCATGAGAATGACTCAGCGACTCGGAATGAAGTGAGGAAAGTATTGCGCCTGTTCCAAGCTGTTTCTAGAAAGCTTTTGCATGAAGCAGAAGCAAAAGCTAAGTCAAATGATAAAGAAAGAAAAAGGGTTGATTTACAAGCTGTGAAGATACTTAAGGAGAACGGGAACTTTGTTAACACAGGGAAGCATATATTGGGACCTGTCCCCGGGGTTGAAGTTGGTGATGAGTTTCAATACAGAGTAGAGCTTAATATAATTGGCCTTCATCGCCAGATTCAGGGTGGTATAGATTATACGAAGCACAATAATAAGGTCCTTGCAACTAGTATTGTTGCGTCGGGGGGCTATGCTGATGATTTGGATAATACAGATGTTTTGATATACACAGGGCAGGGTGGAAATGTGATGAGCACTGGTAAAGAGCCAGAAGATCAGAAGCTTGAAAGGGGAAATCTTGCATTGAAAAACAGTAGTGAGGAAAAGAATCCTGTTAGGGTGATACGAGGCTCTGATTCACCGGATGGAAAAAGTAAGATATATGTTTATGATGGGCTGTATCTAGTTGAGTCATTTTGGCAGGATATGGGGACCCATGGGAAGCTGGTTTATAGGTTTCGCTTGCGAAGAATCCCGGGTCAACCAGAGCTTGCCTTGAAGGAAGTGAAAAAATCTAATAAGTTCAAAACAAGAGAAGGTCGATGCGTGGAAGATATTTCCTGTGGGAAAGAGAGAATTCCCATATGTGCTGTGAACACCATAGACAACGAAAAACCCCCACCATTTAAATACATAAAGAAGTTGATATATCCTGATTCTTGCAACCTTGTCCCTCCAGAAGGCTGTGGTTGTACTAATGGATGCTCGGACCGTGCGAAATGTTCTTGTGTTCGAAAAAATGGAGGGGAGATTCCATTTAATCATAATGGGGCTATTGTAGAAGCAAAGCCTCTAGTCTACGAGTGTGGGCCTAAATGCAAGTGCCCTTCAACCTGCTATAACAGAGTCAGCCAACATGGCATCAATATCCAACTCGAAATTTTTAAAACCAATTCAAGGGGATGGGGTGTTAGATCCCTAAATTCCATCGCTTCAGGAAGTTTTATCTGTGAATATATAGGAGAGGTTCTTGAAGACAAGGTAGCTGAACTAAGAACTGGTAATGATGAGTATCTTTTTGATATTGGAAATAAAAACAACAATACTCTCTGGGACGGACTTTCGACCCTTTTGCCCGATTCGCAGTCACATTCTTGTGAAGTAGTGATGGATGGTGGCTTCACCATCGATGCTGCTCAGTTTGGTAACGTGGGGAGATTCGTCAACCATAGTTGCTCCCCTAATCTTTATGCTCAGAATATCCTTTATGATCATCATGACAACAGGGTTCCTCACGTCATGCTGTTTGCTGCCGAGAACATTCCTCCCTTGCAAGAGCTGACTTACGACTACAATTACATGATAGATCAGGTTTACGATTCCGATGGCAATGTCAAAAAGAAGTTCTGCTATTGTGGTTCTGTGGATTGTACTGGTAGGTTGTATTGA 3432 0.4199 MTTSMPVCNEQSEEEFGKQMMELGDSSVVARPKFKCRKVCAVRDYPEGCGPFGNADGTSVEDKNSEDLECDDVTPDHPDDSQHSEHENNLVVTETIELISDCSLKKEDPGNLSDQVALVGMETLDAEFATESSSLKKEVPVENLGAEFATESSSLKKEVPVETLSAQFATESSSLKKEVPVETLGAEFATESSSLKKEVPVVSSHLVDGPILDNDEHANVVLADMETLGGESAAEISSLKKENPIVSSHKVDGSILANDEPDKVILVGTETSDMEFAIQDSVKQESLYMSKALSPVGESAMSDDSKSSSSNINIGGSGACMEEAVTRRYPPRRNFAAVRDFPRLCGRNAPRLTKDERLKELSSLNEKGTGQQNLTVDASLLKEVADTDAKEVENNKRKPGNIVQAGSEEENNATQRVKKLDVFEPSSEMRLALDNTREKSTKLPEKRNHHQVNINSRAVAKEEVMNTIQVEGTSELDAYRPEVQSPEKKPLAISREEVVLGLKSKSECPWTSGVSSSSKSKPTSIGGTEEKKAKKVDFYAQLDRSKTAVKTKDIRSHSGHEPLKKKKLNSPSDDMGQLVGREKNSLDPNENNKVFKSVTKSHGSSVPKSSSVPRSSVMVPPIGCSNFSGHENDSATRNEVRKVLRLFQAVSRKLLHEAEAKAKSNDKERKRVDLQAVKILKENGNFVNTGKHILGPVPGVEVGDEFQYRVELNIIGLHRQIQGGIDYTKHNNKVLATSIVASGGYADDLDNTDVLIYTGQGGNVMSTGKEPEDQKLERGNLALKNSSEEKNPVRVIRGSDSPDGKSKIYVYDGLYLVESFWQDMGTHGKLVYRFRLRRIPGQPELALKEVKKSNKFKTREGRCVEDISCGKERIPICAVNTIDNEKPPPFKYIKKLIYPDSCNLVPPEGCGCTNGCSDRAKCSCVRKNGGEIPFNHNGAIVEAKPLVYECGPKCKCPSTCYNRVSQHGINIQLEIFKTNSRGWGVRSLNSIASGSFICEYIGEVLEDKVAELRTGNDEYLFDIGNKNNNTLWDGLSTLLPDSQSHSCEVVMDGGFTIDAAQFGNVGRFVNHSCSPNLYAQNILYDHHDNRVPHVMLFAAENIPPLQELTYDYNYMIDQVYDSDGNVKKKFCYCGSVDCTGRLY 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03645 1143 Pfam SAD/SRA domain 694 842 IPR003105 -
Vivi2g03645 1143 Gene3D SET domain 859 1143 IPR046341 -
Vivi2g03645 1143 ProSiteProfiles YDG domain profile. 695 838 IPR003105 -
Vivi2g03645 1143 MobiDBLite consensus disorder prediction 508 524 - -
Vivi2g03645 1143 MobiDBLite consensus disorder prediction 389 414 - -
Vivi2g03645 1143 Pfam SET domain 982 1113 IPR001214 GO:0005515
Vivi2g03645 1143 ProSiteProfiles Post-SET domain profile. 1127 1143 IPR003616 -
Vivi2g03645 1143 Pfam Pre-SET motif 867 963 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi2g03645 1143 ProSiteProfiles Pre-SET domain profile. 908 968 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi2g03645 1143 SMART set_7 971 1119 IPR001214 GO:0005515
Vivi2g03645 1143 MobiDBLite consensus disorder prediction 547 571 - -
Vivi2g03645 1143 MobiDBLite consensus disorder prediction 507 531 - -
Vivi2g03645 1143 Gene3D - 677 858 IPR036987 -
Vivi2g03645 1143 MobiDBLite consensus disorder prediction 47 87 - -
Vivi2g03645 1143 SMART G9a_1 690 842 IPR003105 -
Vivi2g03645 1143 SUPERFAMILY PUA domain-like 676 851 IPR015947 -
Vivi2g03645 1143 MobiDBLite consensus disorder prediction 547 617 - -
Vivi2g03645 1143 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 81 1143 IPR025794 GO:0016571
Vivi2g03645 1143 ProSiteProfiles SET domain profile. 971 1113 IPR001214 GO:0005515
Vivi2g03645 1143 SUPERFAMILY SET domain 854 1114 IPR046341 -
Vivi2g03645 1143 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 512 1136 - -
Vivi2g03645 1143 CDD SET_AtSUVH-like 888 1114 - -
Vivi2g03645 1143 MobiDBLite consensus disorder prediction 590 616 - -
Vivi2g03645 1143 SMART PostSET_3 1127 1143 IPR003616 -
Vivi2g03645 1143 SMART preset_2 864 955 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03645 Vivi-Chr2 145880348 145884686 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03645 691 1143 EF-hand Containing Proteins AT5G13960 42.975 3.69e-114 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi2g03645 SAD_SRA 1.4e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03645 K11420 - gmx:100803378 1109.75