Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03644 ATGACAACATCAATGCCAGTCTGTAATGAACAATCTGAAGAAGAGTTTGGGAAGCAGATGATGGAACTGGGAGACTCTAGTGTCGTTGCTCGGCCTAAGTTTAAGTGCCGTAAAGTTTGTGCTGTTCGTGATTATCCAGAAGGATGTGGACCGTTTGGCAATGCTGATGGTACGAGCGTTGAGGATAAGAATAGTGAAGATTTGGAGTGTGATGATGTTACTCCTGACCATCCAGATGATTCTCAACATTCTGAGCATGAAAATAATTTGGTTGTTACAGAGACTATTGAATTAATAAGTGACTGTAGTTTGAAGAAGGAAGATCCTGGGAATTTGTCTGATCAAGTGGCGTTGGTGGGCATGGAAACTTTGGATGCAGAATTTGCTACAGAAAGCTCTAGTTTGAAGAAGGAAGTTCCTGTGGAAAATTTGGGTGCTGAATTCGCTACAGAAAGCTCTAGTTTGAAGAAGGAAGTTCCTGTTGAAACTTTGAGTGCCCAATTTGCTACTGAAAGCTCTAGTTTGAAGAAGGAAGTTCCTGTGGAAACTTTGGGTGCAGAATTTGCTACAGAAAGCTCTAGTTTGAAAAAGGAAGTTCCTGTGGTTTCATCTCATCTAGTGGATGGACCTATTTTGGATAATGACGAACATGCAAATGTGGTGTTGGCGGACATGGAAACTTTGGGCGGGGAATCTGCAGCAGAAATCAGTAGTTTGAAGAAGGAAAATCCAATTGTTTCATCCCATAAGGTGGATGGGTCTATTTTGGCTAATGATGAACCAGATAAAGTGATATTGGTGGGCACGGAAACTTCGGATATGGAATTTGCAATACAAGACTCTGTAAAACAAGAGTCCTTATATATGTCGAAGGCATTGTCTCCAGTTGGTGAGTCAGCTATGTCTGATGACTCAAAATCCTCGTCATCCAATATCAATATAGGTGGTTCCGGGGCTTGTATGGAGGAGGCTGTAACTAGAAGGTATCCTCCTCGTAGAAATTTTGCAGCGGTCAGAGACTTTCCACGATTATGTGGGCGCAATGCTCCCCGTCTTACTAAGGATGAGCGTTTAAAGGAGCTCTCTTCTCTGAATGAAAAGGGAACAGGTCAACAAAACTTGACTGTAGATGCCAGTCTGTTGAAAGAAGTTGCAGACACTGATGCAAAAGAAGTGGAAAATAACAAGAGAAAGCCCGGTAACATCGTTCAAGCTGGCTCTGAAGAAGAGAATAATGCTACGCAGAGAGTCAAGAAGCTGGATGTATTTGAACCATCTTCTGAGATGAGACTGGCACTGGATAACACAAGAGAAAAGAGCACTAAACTTCCCGAAAAACGCAATCACCATCAGGTTAACATAAATTCCAGGGCAGTGGCTAAAGAGGAAGTTATGAATACTATACAGGTCGAGGGAACATCAGAGCTAGATGCTTACCGCCCAGAAGTCCAAAGTCCTGAGAAAAAACCTTTGGCTATATCAAGAGAGGAAGTAGTGCTAGGTTTGAAGTCTAAATCAGAATGTCCTTGGACATCTGGAGTTAGTAGTTCTTCCAAATCTAAACCAACATCAATAGGTGGTACAGAAGAAAAGAAGGCAAAGAAAGTTGATTTTTATGCCCAGCTAGACAGGTCTAAAACTGCTGTCAAGACGAAAGATATACGGAGTCATTCTGGGCATGAGCCATTGAAAAAGAAAAAACTAAACTCCCCTTCTGATGACATGGGTCAACTAGTAGGACGGGAGAAGAATTCTCTAGACCCTAATGAAAATAACAAAGTCTTTAAAAGTGTCACAAAATCACATGGTTCAAGTGTCCCAAAATCTTCGAGTGTCCCAAGATCAAGTGTTATGGTTCCTCCTATTGGCTGTAGTAATTTCAGTGGTCATGAGAATGACTCAGCGACTCGGAATGAAGTGAGGAAAGTATTGCGCCTGTTCCAAGCTGTTTCTAGAAAGCTTTTGCATGAAGCAGAAGCAAAAGCTAAGTCAAATGATAAAGAAAGAAAAAGGGTTGATTTACAAGCTGTGAAGATACTTAAGGAGAACGGGAACTTTGTTAACACAGGGAAGCATATATTGGGACCTGTCCCCGGGGTTGAAGTTGGTGATGAGTTTCAATACAGAGTAGAGCTTAATATAATTGGCCTTCATCGCCAGATTCAGGGTGGTATAGATTATACGAAGCACAATAATAAGGTCCTTGCAACTAGTATTGTTGCGTCGGGGGGCTATGCTGATGATTTGGATAATACAGATGTTTTGATATACACAGGGCAGGGTGGAAATGTGATGAGCACTGGTAAAGAGCCAGAAGATCAGAAGCTTGAAAGGGGAAATCTTGCATTGAAAAACAGTAGTGAGGAAAAGAATCCTGTTAGGGTGATACGAGGCTCTGATTCACCGGATGGAAAAAGTAAGATATATGTTTATGATGGGCTGTATCTAGTTGAGTCATTTTGGCAGGATATGGGGACCCATGGGAAGCTGGTTTATAGGTTTCGCTTGCGAAGAATCCCGGGTCAACCAGAGCTTGCCTTGAAGGAAGTGAAAAAATCTAATAAGTTCAAAACAAGAGAAGGTCGATGCGTGGAAGATATTTCCTGTGGGAAAGAGAGAATTCCCATATGTGCTGTGAACACCATAGACAACGAAAAACCCCCACCATTTAAATACATAAAGAAGTTGATATATCCTGATTCTTGCAACCTTGTCCCTCCAGAAGGCTGTGGTTGTACTAATGGATGCTCGGACCGTGCGAAATGTTCTTGTGTTCGAAAAAATGGAGGGGAGATTCCATTTAATCATAATGGGGCTATTGTAGAAGCAAAGCCTCTAGTCTACGAGTGTGGGCCTAAATGCAAGTGCCCTTCAACCTGCTATAACAGAGTCAGCCAACATGGCATCAATATCCAACTCGAAATTTTTAAAACCAATTCAAGGGGATGGGGTGTTAGATCCCTAAATTCCATCGCTTCAGGAAGTTTTATCTGTGAATATATAGGAGAGGTTCTTGAAGACAAGGTAGCTGAACTAAGAACTGGTAATGATGAGTATCTTTTTGATATTGGAAATAAAAACAACAATACTCTCTGGGACGGACTTTCGACCCTTTTGCCCGATTCGCAGTCACATTCTTGTGAAGTAGTGATGGATGGTGGCTTCACCATCGATGCTGCTCAGTTTGGTAACGTGGGGAGATTCGTCAACCATAGTTGCTCCCCTAATCTTTATGCTCAGAATATCCTTTATGATCATCATGACAACAGGGTTCCTCACGTCATGCTGTTTGCTGCCGAGAACATTCCTCCCTTGCAAGAGCTGACTTACGACTACAATTACATGATAGATCAGGTTTACGATTCCGATGGCAATGTCAAAAAGAAGTTCTGCTATTGTGGTTCTGTGGATTGTACTGGTTTCCTCCGGGGGAGGTAA 3438 0.4212 MTTSMPVCNEQSEEEFGKQMMELGDSSVVARPKFKCRKVCAVRDYPEGCGPFGNADGTSVEDKNSEDLECDDVTPDHPDDSQHSEHENNLVVTETIELISDCSLKKEDPGNLSDQVALVGMETLDAEFATESSSLKKEVPVENLGAEFATESSSLKKEVPVETLSAQFATESSSLKKEVPVETLGAEFATESSSLKKEVPVVSSHLVDGPILDNDEHANVVLADMETLGGESAAEISSLKKENPIVSSHKVDGSILANDEPDKVILVGTETSDMEFAIQDSVKQESLYMSKALSPVGESAMSDDSKSSSSNINIGGSGACMEEAVTRRYPPRRNFAAVRDFPRLCGRNAPRLTKDERLKELSSLNEKGTGQQNLTVDASLLKEVADTDAKEVENNKRKPGNIVQAGSEEENNATQRVKKLDVFEPSSEMRLALDNTREKSTKLPEKRNHHQVNINSRAVAKEEVMNTIQVEGTSELDAYRPEVQSPEKKPLAISREEVVLGLKSKSECPWTSGVSSSSKSKPTSIGGTEEKKAKKVDFYAQLDRSKTAVKTKDIRSHSGHEPLKKKKLNSPSDDMGQLVGREKNSLDPNENNKVFKSVTKSHGSSVPKSSSVPRSSVMVPPIGCSNFSGHENDSATRNEVRKVLRLFQAVSRKLLHEAEAKAKSNDKERKRVDLQAVKILKENGNFVNTGKHILGPVPGVEVGDEFQYRVELNIIGLHRQIQGGIDYTKHNNKVLATSIVASGGYADDLDNTDVLIYTGQGGNVMSTGKEPEDQKLERGNLALKNSSEEKNPVRVIRGSDSPDGKSKIYVYDGLYLVESFWQDMGTHGKLVYRFRLRRIPGQPELALKEVKKSNKFKTREGRCVEDISCGKERIPICAVNTIDNEKPPPFKYIKKLIYPDSCNLVPPEGCGCTNGCSDRAKCSCVRKNGGEIPFNHNGAIVEAKPLVYECGPKCKCPSTCYNRVSQHGINIQLEIFKTNSRGWGVRSLNSIASGSFICEYIGEVLEDKVAELRTGNDEYLFDIGNKNNNTLWDGLSTLLPDSQSHSCEVVMDGGFTIDAAQFGNVGRFVNHSCSPNLYAQNILYDHHDNRVPHVMLFAAENIPPLQELTYDYNYMIDQVYDSDGNVKKKFCYCGSVDCTGFLRGR 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03644 1145 ProSiteProfiles YDG domain profile. 695 838 IPR003105 -
Vivi2g03644 1145 MobiDBLite consensus disorder prediction 508 524 - -
Vivi2g03644 1145 MobiDBLite consensus disorder prediction 389 414 - -
Vivi2g03644 1145 Pfam SET domain 982 1113 IPR001214 GO:0005515
Vivi2g03644 1145 Gene3D SET domain 859 1142 IPR046341 -
Vivi2g03644 1145 ProSiteProfiles Pre-SET domain profile. 908 968 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi2g03644 1145 SMART set_7 971 1119 IPR001214 GO:0005515
Vivi2g03644 1145 MobiDBLite consensus disorder prediction 547 571 - -
Vivi2g03644 1145 MobiDBLite consensus disorder prediction 507 531 - -
Vivi2g03644 1145 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 81 1144 IPR025794 GO:0016571
Vivi2g03644 1145 SMART PostSET_3 1127 1143 IPR003616 -
Vivi2g03644 1145 Gene3D - 677 858 IPR036987 -
Vivi2g03644 1145 MobiDBLite consensus disorder prediction 47 87 - -
Vivi2g03644 1145 SMART G9a_1 690 842 IPR003105 -
Vivi2g03644 1145 SUPERFAMILY PUA domain-like 676 851 IPR015947 -
Vivi2g03644 1145 Pfam Pre-SET motif 867 963 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi2g03644 1145 MobiDBLite consensus disorder prediction 547 617 - -
Vivi2g03644 1145 ProSiteProfiles SET domain profile. 971 1113 IPR001214 GO:0005515
Vivi2g03644 1145 SUPERFAMILY SET domain 854 1114 IPR046341 -
Vivi2g03644 1145 CDD SET_AtSUVH-like 888 1114 - -
Vivi2g03644 1145 ProSiteProfiles Post-SET domain profile. 1127 1143 IPR003616 -
Vivi2g03644 1145 MobiDBLite consensus disorder prediction 590 616 - -
Vivi2g03644 1145 SMART preset_2 864 955 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi2g03644 1145 Pfam SAD/SRA domain 694 842 IPR003105 -
Vivi2g03644 1145 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 512 1136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03644 Vivi-Chr2 145879836 145884686 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03644 631 1140 Su(var)3-9 homologs AT5G04940 40.341 2.34e-113 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi2g03644 SAD_SRA 1.4e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03644 K11420 - gmx:100803378 1104.35