Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03638 ATGAATTTCCAACAACTCCCTCATCTCTTTCTTCAACAGATTCCTAATTTGAGAAACTCGAGTGTAATCAAGACTAGTATTATGAAGGAAGAGACTAAATGTGCACAGATGACAATCTTTTATGATGGGAAAGTACTTGTATTTGATGATGTTCCAGCTGAAAAAGCCAAGGATATTATGGTCTTTTCTGCCAGAAATCATGTTCAAGAACATCCTCAAGTAGCATCCACACCTGTTATTTATGATTTACCAATGACTAGGAAAGCTTCACTTCATCGGTTCTTGGAGAAAAGAAAGGATAGAATTGCTGCAAGAGCACCATATCAAACAAGTAATCCAACAGTGACTCTTAGTAAGCCGATTGATGAACATATGTCATGGCTTTCTTTGGCACCACAATCACCACAAGATCACAAATCTGAGTGTAGCTCTACCTCTGTGTTATTTTAA 450 0.3733 MNFQQLPHLFLQQIPNLRNSSVIKTSIMKEETKCAQMTIFYDGKVLVFDDVPAEKAKDIMVFSARNHVQEHPQVASTPVIYDLPMTRKASLHRFLEKRKDRIAARAPYQTSNPTVTLSKPIDEHMSWLSLAPQSPQDHKSECSSTSVLF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03638 149 ProSiteProfiles Tify domain profile. 30 65 IPR010399 -
Vivi2g03638 149 SMART tify_2 30 65 IPR010399 -
Vivi2g03638 149 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 30 126 IPR040390 -
Vivi2g03638 149 Pfam Jas motif 84 109 IPR018467 -
Vivi2g03638 149 Pfam tify domain 35 60 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03638 Vivi-Chr2 145735385 145736490 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03638 25 131 Tify Gene Family AT1G19180 37.500 1.09e-23 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vivi2g03638 tify 5.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03638 K13464 - mtr:112421766 197.208