Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03627 ATGAAGTGTTTCTTCTTCAATAAAAATTCCAAATCAAACCCAAATTTAAACCCTAAAAAGAAGAAAAATCAAACCAAAAATTCCACCAATGCAAATTCATCGCCATCGCCATCGCCAAGAAGTATAACAGAGATATACAAAGAGAATGAACACAATTTCAGAGTTTTCACTGTGCAGGAGCTTGTAAATGCAACAAATGGTTTCAATAAGATGCTGAAAATTGGAGAAGGTGGCTTTGGGAAAGTATATAGAGGAACAATTTCTCCTGAGAATGGAATGGGTGACCAAATTGTGGTAGCTATTAAAAAACTCAACACTCGTGGACTTCAGGGGCATAAAGAGTGGCTTGCAGAAGTACAATTTTTGGGAATTGTGAACCATCCAAATTTGGTGAAACTTTTGGGATACTGTTCTGTGGATAGTGAAAAAGGGATCCAACGGTTGTTAGTGTATGAGTATATGCCTAATAGGAGTTTAGAAGACCATCTTTTCAGTCGTTCGTTACCTACTTTGCCTTGGAAAACAAGATTGCAGATTATGCTTGGTGCTGCTCAAGGATTACAGTATCTACATGAGGGTTTGGAGATTCAGGTGATATACAGAGATTTTAAATCTTCAAATGTGCTCTTGGACAAGAAATTCCATCCCAAACTCTCAGATTTTGGTCTTGCTAGGGAGGGCCCAACTGGTGATCAGACTCATGTTTCCACTGCAGTAGTTGGGACAAGGGGTTATGCGGCGCCAGAGTATATCGAAACAGGTCATTTAAAATCAAAGAGTGACATTTGGAGTTTTGGCGTGGTACTCTACGAGATTCTCACAGGAAGACGAACAATAGAAAGAAATCTTCCAGCAGCGCAACAAAAGCTTATAGAATGGGTTAAAAACTACCCTGCTGATAGTGGCAGATTCACCTTGATAATTGATCCTCGACTCGCGAAACAGTATTCTGTTAAGGCAGCTAGGAAAATTGCTAAGTTGGCAGATAGTTGCTTGAAGAAGAATGCTGAAGATAGGCCATCAATGAGTCAGATTGTTGAAAGCTTGAAACAAGCATTGCAATGTTCATAA 1071 0.394 MKCFFFNKNSKSNPNLNPKKKKNQTKNSTNANSSPSPSPRSITEIYKENEHNFRVFTVQELVNATNGFNKMLKIGEGGFGKVYRGTISPENGMGDQIVVAIKKLNTRGLQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDSEKGIQRLLVYEYMPNRSLEDHLFSRSLPTLPWKTRLQIMLGAAQGLQYLHEGLEIQVIYRDFKSSNVLLDKKFHPKLSDFGLAREGPTGDQTHVSTAVVGTRGYAAPEYIETGHLKSKSDIWSFGVVLYEILTGRRTIERNLPAAQQKLIEWVKNYPADSGRFTLIIDPRLAKQYSVKAARKIAKLADSCLKKNAEDRPSMSQIVESLKQALQCS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03627 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Vivi2g03627 356 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 154 356 - -
Vivi2g03627 356 CDD STKc_IRAK 74 351 - -
Vivi2g03627 356 ProSiteProfiles Protein kinase domain profile. 68 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03627 356 ProSitePatterns Protein kinases ATP-binding region signature. 74 103 IPR017441 GO:0005524
Vivi2g03627 356 PANTHER OS01G0588500 PROTEIN-RELATED 27 353 - -
Vivi2g03627 356 MobiDBLite consensus disorder prediction 1 42 - -
Vivi2g03627 356 Pfam Protein tyrosine and serine/threonine kinase 72 349 IPR001245 GO:0004672|GO:0006468
Vivi2g03627 356 SUPERFAMILY Protein kinase-like (PK-like) 49 349 IPR011009 -
Vivi2g03627 356 PIRSF ILK 51 356 - -
Vivi2g03627 356 Gene3D Phosphorylase Kinase; domain 1 48 153 - -
Vivi2g03627 356 Gene3D Transferase(Phosphotransferase) domain 1 154 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03627 Vivi-Chr2 145445166 145447479 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03627 3 349 Glycoside Hydrolase AT3G07070 42.857 4.97e-97 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vivi2g03627 PK_Tyr_Ser-Thr 5.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03627 - - gmx:100782248 555.829