Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03620 ATGGCTTCAAAGTATGGAAAAGAATTTGTCTCTGCAGCAGTTGAACTGCGCCCTGACTGTGGTGTAAATCGCTTGTTGGTTGAGAAATTTTCTGCTAAAGCCCCTGATGGTCCAACCAACCAAGATAAAAATATTACCGGGACATCCCAAGCTGATTGTGCTGTTCTCATCATTGATTTCACTACTGGTGGTTTTGAGGCTGATAACAATGATCATATGAGAGATGATGAAATAGATGAAGATTGGAAAACATTTTTGGTTACATATACTGGTGATGATGATGATGAAATGGATGAAGATTATAGGTTCTTTTTGGCTACATATAATTCTGAGATTGAAACAGATTGTGCTAGTAATCATAGTGGTGGTTCAAACATTGGTAGTGATGAAACGGATGAAGAATATAGATCCTTTTTAGCTACATATGATCCTGATGTTGAAAATGACAGTGCTGGTAATCAAAGTGGTGGTTCAAATATTGGCAATGATGAAACAGATGCGGAATACATATCGTTTTTAGCTACATGTGATCCTAATGTTGAAAATGACAGTGCTGGTAATCAAAGTGGTGGTTCAAATATTGGCAATGATGAAATAGATGCGGAATACATATCGTTTTTAGCTGATCCTGCTGTTGAAAATGATAGTGTTGGTAATCGAAGTGGTGGTTCAAATGTTGACGTCAACTTAGGCAACAACAATGTCAAGAAGGAAATAGAAGAAGGCTACAATTGTTTTTCAAATCAATTTGTTCCTGATTATATTAGCAACAGGGTTCATGTTGATGAAGATGATCGGTTATTAAGAAAAAGTTTTAGTGTTGGGAAAAGCACATTACTTTCTAATCAAGAATTTGATACCCCTAAAATGCAACGTGTTGTTGATGAAGATTATAAACAAATCCTTAATTCTGGGAGGGTTGTTGGTGGTGATTTTGTCTATGGTTCTTTTATGAATGCCAATGACACATCCAATGTGAAAGATGAACGTAATTCCTCTGATTCAGATCTAATTGTTTTGGAATCTTGTCCATATTGTGAAAACACCCCTTTCAAATCTTCAAAAGCATATGATTCATCTTGTTTTGGAGAAGAAATGCACCCGAAAGACAACAAGCAAATGACTTGTATTTATCATTCTCAATTTCGGAAAAGACTTGTGGAATATCTTGATAGGCCTTATGACTATGAAGAGTATAAATCTCTTCTTGCTAAAGCAAATGAACGAAGGCAAAAGGAACGTCATTTAGAAACACGGCAGGGGGTGATTGAGTCATATCACTGTGGAGGTGTCACCAAATCGCATCTTGATTCGCACCCTGATGTAGCCAAAGCTATTGCCATGGAGTCCAAGGAAAATCGTATTTTGTTTCTCTTGCGTGGATTTTTTTTCTGGATACAAATTTTGTATAGATTTTTTCTGGATACAAGTATTACCATTTCATTTTATGATACGACGCGGTTGGTTGATATGGAGCACCTTACTGCCCACCACCAGCGCCTTTTAGTAGAGTTTTGCAGGTAA 1524 0.3688 MASKYGKEFVSAAVELRPDCGVNRLLVEKFSAKAPDGPTNQDKNITGTSQADCAVLIIDFTTGGFEADNNDHMRDDEIDEDWKTFLVTYTGDDDDEMDEDYRFFLATYNSEIETDCASNHSGGSNIGSDETDEEYRSFLATYDPDVENDSAGNQSGGSNIGNDETDAEYISFLATCDPNVENDSAGNQSGGSNIGNDEIDAEYISFLADPAVENDSVGNRSGGSNVDVNLGNNNVKKEIEEGYNCFSNQFVPDYISNRVHVDEDDRLLRKSFSVGKSTLLSNQEFDTPKMQRVVDEDYKQILNSGRVVGGDFVYGSFMNANDTSNVKDERNSSDSDLIVLESCPYCENTPFKSSKAYDSSCFGEEMHPKDNKQMTCIYHSQFRKRLVEYLDRPYDYEEYKSLLAKANERRQKERHLETRQGVIESYHCGGVTKSHLDSHPDVAKAIAMESKENRILFLLRGFFFWIQILYRFFLDTSITISFYDTTRLVDMEHLTAHHQRLLVEFCR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03620 507 Gene3D - 1 43 IPR042277 -
Vivi2g03620 507 PANTHER F14J8.16 PROTEIN 68 468 - -
Vivi2g03620 507 MobiDBLite consensus disorder prediction 144 164 - -
Vivi2g03620 507 MobiDBLite consensus disorder prediction 147 164 - -
Vivi2g03620 507 Coils Coil 396 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03620 Vivi-Chr2 145193457 145196206 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03620 19 67 Eukaryotic Initiation Factors Gene Family AT1G07930 55.769 4.09e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03620 - - vvo:131641680 914.835