Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03584 ATGGATTCTCTTGCATCTCCATTTGACAACTTTGGCTTCAACTATGAGAACAACTACGAAACAGCCCCAAATTGTTTACCACTTGAAACTCACCCTGATAATCACTATGTTGCTCCAACAAGACCAACCAAGAAGATCAAGACATCGATAAACCCTCCTTCCTATTCATCACCTCAACTCATTTCTTTTGAGCACTTCAATGCAACACCAGTTGCTTCTACCGAACTTTACGACCTCGATTATTCTGATGTAAAGCCTAAACTCCAGAATGGGTGCAATGAAAACAAAGAAATTGCAGCAAATTATGATATCCGAGTGAATCAGCCGAGGAACACAATTCAAGCAAAAGAACATGTAGTGGCTGAGAGAAAACGAAGAGAAAAGCTCACCAGAAGTTTTATTGCTCTTTCTGCCATCGTTCCTGGCCTTAAGAAGATGGATAAAGCTTCTGTACTGGGAGATGCAATAACCTATATGAAAAAACTACAAGCACGTTTGCATACACTAGAGGCACAAGCTGAACACAACAAAAAAACTGGATCTGCAATACAAGTAAAGAGATCTGTTATCTTTACTGATAACCATGATGATGATGACAGCAACAACTCCAACAACCAGACACTTCCTGAAATCGAAGTAAGAGTTTCAAGAAAAGATGTACTCATCAAGATTCAATGTGACAAACACAAGGGACGTGCCTCTACCTCTACGGTACTAGGAAAACTAGAAACCCTAAATCTCACAGTTCAAAGTAGTAACTTATTGCCCTTCGGGAACAACATTGCTGATCTAACTATTGTTGCTCAGATGAACGAGGAAAACTGTGTGACAGCAAAGGATCTCCTGGGAAGCATACGAAATGCATTAATCATCAATAATAATTAA 885 0.3944 MDSLASPFDNFGFNYENNYETAPNCLPLETHPDNHYVAPTRPTKKIKTSINPPSYSSPQLISFEHFNATPVASTELYDLDYSDVKPKLQNGCNENKEIAANYDIRVNQPRNTIQAKEHVVAERKRREKLTRSFIALSAIVPGLKKMDKASVLGDAITYMKKLQARLHTLEAQAEHNKKTGSAIQVKRSVIFTDNHDDDDSNNSNNQTLPEIEVRVSRKDVLIKIQCDKHKGRASTSTVLGKLETLNLTVQSSNLLPFGNNIADLTIVAQMNEENCVTAKDLLGSIRNALIINNN 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03584 294 Gene3D - 106 179 IPR036638 GO:0046983
Vivi2g03584 294 PANTHER BHLH TRANSCRIPTION FACTOR 39 289 - -
Vivi2g03584 294 SMART finulus 119 168 IPR011598 GO:0046983
Vivi2g03584 294 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 113 162 IPR011598 GO:0046983
Vivi2g03584 294 Pfam Helix-loop-helix DNA-binding domain 117 163 IPR011598 GO:0046983
Vivi2g03584 294 Coils Coil 159 179 - -
Vivi2g03584 294 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 118 177 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03584 Vivi-Chr2 144203012 144206037 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03584 110 289 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.565 2.21e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi2g03584 HLH 9.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03584 - - vvo:131646947 515.768