Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g03574 | ATGGTGGCTACAGATATTGCCCTTCTTTCTATGACTACTACTACTCAGATCCAAAAATCATCACAATCACAATCAAACCCTAACATCACCACAACCACCACCACACCATCATCATCAACTTGGATGTGGAACCCTAAACAACAACAAGAAGATGAAGATTCATGGGAGGTAAGAGCTTTTGCAGAAGACACAAGGAACATCATGAACGCAACATGGCCACCAAGATCTTACACCTGCACTTTTTGTAGAAGAGAGTTCCGGTCAGCTCAAGCTCTTGGCGGTCATATGAACGTCCACCGCCGAGACCGTGCTCGTCTCCATCAAAATCAACCACCGTTAAATCCTTCTTCTCAGTTCATACATATTCCTCCTCAAGAGCTTGTTAATGCTGGATTGTGCCTTTTTTACCATTCACCAAACCCTAATATTTCTTCCTTCAATGATTCTAATGGAGATCAATCTCCTTCAACTCTTCTCTCTATCTCATCATCATCTTATCCAACAAACAACTTGATGATGCAAAGGCAAATGCAAACTTGTTCTCCTACACCTTTTCATTTTCAGGCTAATTCAGCTCGAAACTTTATCAATAATAGCATCTCTTCTTTTTCTAACAAACCTGCTATCTGCACCTCCATAGACGATAAGGTTCATGAAATTGAAGAACTCGATCTTGAGCTACGTTTGGGGAACAAGCCAGCACCGACATGA | 711 | 0.4149 | MVATDIALLSMTTTTQIQKSSQSQSNPNITTTTTTPSSSTWMWNPKQQQEDEDSWEVRAFAEDTRNIMNATWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQNQPPLNPSSQFIHIPPQELVNAGLCLFYHSPNPNISSFNDSNGDQSPSTLLSISSSSYPTNNLMMQRQMQTCSPTPFHFQANSARNFINNSISSFSNKPAICTSIDDKVHEIEELDLELRLGNKPAPT | 236 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g03574 | 236 | MobiDBLite | consensus disorder prediction | 18 | 51 | - | - | |
Vivi2g03574 | 236 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 79 | 99 | IPR013087 | - | |
Vivi2g03574 | 236 | PANTHER | OS07G0101800 PROTEIN | 49 | 233 | - | - | |
Vivi2g03574 | 236 | SMART | c2h2final6 | 77 | 99 | IPR013087 | - | |
Vivi2g03574 | 236 | Gene3D | Classic Zinc Finger | 72 | 120 | - | - | |
Vivi2g03574 | 236 | MobiDBLite | consensus disorder prediction | 18 | 48 | - | - | |
Vivi2g03574 | 236 | Pfam | C2H2-type zinc finger | 77 | 101 | - | - | |
Vivi2g03574 | 236 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 77 | 104 | IPR013087 | - | |
Vivi2g03574 | 236 | SUPERFAMILY | beta-beta-alpha zinc fingers | 74 | 104 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g03574 | Vivi-Chr2 | 143923921 | 143924917 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g03574 | 38 | 233 | C2H2 Transcription Factor Family | AT4G17810 | 41.584 | 3.33e-38 | 129 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Vivi2g03574 | zf-C2H2_6 | 4.9e-06 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g03574 | - | - | vvo:131646956 | 323.939 |