Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03573 ATGGTGGCTACAGATATTGCCCTTCTTTCCATGACTACTACTGCTCAGATCCAAAAATCATCACAATCACAATCACAATCAAACCCTAACATCACCACAACCACCACTACACCATCATCATCATCAACTTGGATGTGGAACCCTAAACAACAACATCAAGAACAACAAGAAGATGAAGATTCATGGGAGGTAAGAGCTTTTGCAGAAGACACAAGGAACATCATGAACGCAACATGGCCACCAAGATCCTACACCTGCACTTTTTGTAGAAGAGAGTTCCGCTCAGCTCAAGCACTTGGCGGTCATATGAACGTCCACCGCCGCGACCGTGCTCGTCTTCATCAAAATCAACCACCGCTAAATTCCTCCTCTCATCATCCTTCTTCTCAGTTCATACATATCCCTCCTCTTAATGCTGGATTGTGTCTTTTTTACCATTCACCAAACCCTAATATCTCTTCCTTCAATGATTCTAATGGAGATCAATCTCCTTCTACTCTTCTCTCTATCTCATCATCTTATCCAACCAACAACTTGATGATGCAAAGGCAAATGCAAACTTGTTCTCCTACACCTTTTCATTTTCAGGCTAATTCAGCTAGAAACTATCAATAA 615 0.4179 MVATDIALLSMTTTAQIQKSSQSQSQSNPNITTTTTTPSSSSTWMWNPKQQHQEQQEDEDSWEVRAFAEDTRNIMNATWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQNQPPLNSSSHHPSSQFIHIPPLNAGLCLFYHSPNPNISSFNDSNGDQSPSTLLSISSSYPTNNLMMQRQMQTCSPTPFHFQANSARNYQ 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03573 204 PANTHER OS07G0101800 PROTEIN 56 172 - -
Vivi2g03573 204 MobiDBLite consensus disorder prediction 18 51 - -
Vivi2g03573 204 MobiDBLite consensus disorder prediction 18 61 - -
Vivi2g03573 204 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Vivi2g03573 204 Gene3D Classic Zinc Finger 79 133 - -
Vivi2g03573 204 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Vivi2g03573 204 SMART c2h2final6 84 106 IPR013087 -
Vivi2g03573 204 Pfam C2H2-type zinc finger 84 108 - -
Vivi2g03573 204 SUPERFAMILY beta-beta-alpha zinc fingers 81 111 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03573 Vivi-Chr2 143904981 143906284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03573 41 116 C2H2 Transcription Factor Family AT4G17810 67.089 3.41e-34 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vivi2g03573 zf-C2H2_6 4e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03573 - - vvo:131646956 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03573 2 143904981 143906284 Vivi2g03573 2 143904981 143906284 ECH