Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03559 ATGGATCCCAATAATCATTTTAACACTCAAAATTCTGCTAATTTTCCATTTAACCAAAATCCCAACAATTTTCAAAATCCCAACAATTATCAAAATCCCAACTATTATCAAAATCCAAATCAATTTTCCAACCAACATCCTCAAAACATACCTAATTTTGGTTTTCCACCAAATTTCAACCAGTCATCCTCTGTTCCAAACTTTCAACCATATTATGGATCTATGCCGAGAAATCCATCTCAAACACCCCCGTTTAATGGTTATGTGACAATGGCGAATGCAAATTTTCCAAGTGGTGGTGTACCTGAATTTCCCGAGTTTTCAACACAACTAACTATTGGTGGCATGATAGTTTCTAATGAAGTCGGTCCAAATTCAGAGGATTCAACTCCTAAGAGCAAGAAAACTCAGCAACCAGCATGGAACACTGAACAAAATTTGGTGCTAATTAGTGGGTGGATTAAATTTGGAACAAGCAGTGTTGTCAGGAGAAACCAGAAAAGTGAAACATATTGGGGTAAAATTGCTGAGTATTGTAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGACCTGCATGCCGAAACCGTTTTAATTATATGAACAAAGTGTTGGGTAAATGGATTGGCGCTTATGATGGCGCTAAGCGTATGCAAGGAAGTGGTTGGTCGGAGAATGATGTTTTGGCAAAAGCGCAGGAATTATATGCATGTGGGAAGAATGTTAGATTCACTTTAATGGAAGAATGGCACGCTCTCCGTGATCAACCACGTTATGGTAGTCAAGTAGGAGGAAATATTGGCTCAGGAAGTAGTGGATCTAAGAGATCTCGCGAGAGTGATGCATGTGGCTCAAACACTGTAGAATCCAGTGCTCGTCCTATAGGAAGGGAGGCAGCTAAAAAAAAGGGTAAAAAGAAAAGCAAGGATAAAACCAAGAAAATGAAGATGTATCTAAAGCTAACTTCCGAAGAGCATCTAGATGACCGGAAGAACCAGCTGTTGAAAAAGTTGGAAGCCTACAATCAAAATCGTGAAATTGAAGAAAATTATATAGTCAATCGATTTAGAGAGCGTAGAAACAAAATATTGGAAGATAATGCACCTCGTAGTAGAAAATATCTCAATAGAGATCATGCAGCGGCAAACCAAAGACTAATTGACGACTACTTTGCCAATGAGCCTACATATGACGATGCAATGTTTCGTCGTCGGTACCGGATGAAAAAAAATGTTTTCCTTCGAATCGTTGGGGACCTTTCAAGTAGTGATAACTACTTCACCCAGCGAGTTGATGCAGCCAATAAAGAAGGTATATCACCCTTAGCAAAATGTACCACAGCAATGCGAATGTTAGCATATGGTGTGGCAGCAGATGCGGTCGATGAGTGCATCAAAATAGGAGGTACTACAGCATTGGAGTTGTATCTGAGAGCACCAACCCAAGATGACCTGCAAAGAATACTGCATGTTAGTGAAATGTGGGGGTTCCCAGGGATGATTGGGAGTATTGACTGCATGCACTGGGAGTGGAAAAATTGTCCTAAAGCATGGGAAGGACAATTTACTAGAGGGGGTAAGGGAACCACCACAGTTATTCTTGAAGCAGTAGGAAAGGCTCCAAGTGTGAATTTCTTTGTGAATCAACGTCCATATAATATGGCATACCATCTAGCTGATGGTATCTACCCTTCTTATCCAACTTTCGTCAAATCGATTAGACTTCCTCAAAGTGAACCCGATAAATTATTTGCAAAATTTCAGGAGGGATGTCGGAAGGACATCGAACGTGCATTTGGAGTGCTCCAAGCTCGATTTAAAATCATCCGTGAACCAGCTCGCTTGTGGGACATAGCTGATTTGGGTATCATCATGAGGTCATGCATCATATTACATAATATGATTGTTGAGGATGAACGAGATTCATATTCTCAACGTTGGACCGATTGTGAGCAATCTGGGGAAATTGGATCTAGTGCACCACAACCATACTCGACCGAGGTGTTACCCGCTTTTGCAAATCATGTGCGTGCTAGATCAGAGTTCCGTGATCCAAATGTTCATCAAGAATTGCAAGCCGATCTAGTGAAGCACATATGGACAAAGTTTGGAATGTTCCGTGATTGA 2127 0.409 MDPNNHFNTQNSANFPFNQNPNNFQNPNNYQNPNYYQNPNQFSNQHPQNIPNFGFPPNFNQSSSVPNFQPYYGSMPRNPSQTPPFNGYVTMANANFPSGGVPEFPEFSTQLTIGGMIVSNEVGPNSEDSTPKSKKTQQPAWNTEQNLVLISGWIKFGTSSVVRRNQKSETYWGKIAEYCNEHCSFDPPRDGPACRNRFNYMNKVLGKWIGAYDGAKRMQGSGWSENDVLAKAQELYACGKNVRFTLMEEWHALRDQPRYGSQVGGNIGSGSSGSKRSRESDACGSNTVESSARPIGREAAKKKGKKKSKDKTKKMKMYLKLTSEEHLDDRKNQLLKKLEAYNQNREIEENYIVNRFRERRNKILEDNAPRSRKYLNRDHAAANQRLIDDYFANEPTYDDAMFRRRYRMKKNVFLRIVGDLSSSDNYFTQRVDAANKEGISPLAKCTTAMRMLAYGVAADAVDECIKIGGTTALELYLRAPTQDDLQRILHVSEMWGFPGMIGSIDCMHWEWKNCPKAWEGQFTRGGKGTTTVILEAVGKAPSVNFFVNQRPYNMAYHLADGIYPSYPTFVKSIRLPQSEPDKLFAKFQEGCRKDIERAFGVLQARFKIIREPARLWDIADLGIIMRSCIILHNMIVEDERDSYSQRWTDCEQSGEIGSSAPQPYSTEVLPAFANHVRARSEFRDPNVHQELQADLVKHIWTKFGMFRD 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03559 708 MobiDBLite consensus disorder prediction 122 141 - -
Vivi2g03559 708 Pfam Plant transposon protein 538 642 IPR006912 -
Vivi2g03559 708 MobiDBLite consensus disorder prediction 119 141 - -
Vivi2g03559 708 MobiDBLite consensus disorder prediction 299 314 - -
Vivi2g03559 708 PANTHER OS12G0169200 PROTEIN 339 647 - -
Vivi2g03559 708 MobiDBLite consensus disorder prediction 1 27 - -
Vivi2g03559 708 MobiDBLite consensus disorder prediction 262 292 - -
Vivi2g03559 708 MobiDBLite consensus disorder prediction 258 314 - -
Vivi2g03559 708 Coils Coil 324 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03559 Vivi-Chr2 143665767 143681504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03559 85 306 Glutathione S-transferase Gene Family AT5G41240 28.631 1.64e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03559 - - vvo:131633225 1292.72