Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03547 ATGGAAAAACAAAAACTCATTCTCATTCTTATTTTTTCACTTCTATGTTCAAATGGAAACACCTTTTCACTCTCAAGAGACTACGAAATTCTTCTTCATGTCAAAAACACACAAATCAACGACCAAAACAAAAGTCTCAAAGACTGGCTTCCAAACACACAACACTATCCTTGTAACTGGACAGGAATAACCTGCGACTCACAAAACAGATCAGTTGTTTCCATCGACCTCTCCGAAATCGGTATCTACGGAGATTTTCCCTTCAACTTCTGCCGCATTCCATCTCTCCAAAATCTCTCCCTTGCTGTCAACTTTCTCGGAAACTCAATCTCCTCACATTCCATCTTACCATGTTCACATCTTCGCTTGTTAAACATCTCTGACAACTTGTTCGTCGGTAACTTACCGGAGTTCAACTCAGAAACCTTCCAACTAAGAGTACTCGACCTTTCTTTAAACAACTTCTCCGGCAACATCCCGGCGAGTTTCGGCCGGTTTCCTCAACTGAAAACTCTCATTCTCTCTTCAAACCTTTTCACCGGAACGATTCCTTCATTCTTAGGTAATCTAACCGAGTTAACTCATTTCGAACTCACCTACACAGAAACAATGAAGCCAGGTTCTATACCTTCAGAACTCGGAAACCTCACTAAGCTACAATTTCTCTACCTCTCCGACATAAACCTCGTAGGTAACATACCAGATTCCATTGGAAACCTTATTTCCATTGAAAACTTCGATTTGTCTCGAAACTCTTTGTCTGGTGAAATCCCATACACAGTTTCTGGTATGAAAAATGTGAAACGAATTATACTTTTCCAGAACAACCTTTCCGGTGAAATTCCACAAGGTTTATCAAACCTCACAAGTTTGTCTCTCTTAGACCTCTCTCAGAATGCACTCACCGGAAAATTTTCTCAAGAACTGGGTTCATTGAATCTTTCTATACTCCATTTGAACGATAATTTTCTCAGTGGAGAAGTTCCAGAAAGTTTGGCTTTGAATCCAAACTTGCTTAATCTGAGTCTTTTCAACAATAGCTTTTCTGGGAAGCTACCACGAGATCTTGGAAAAAACTCTGCTTTAAGAAATATCGATGTTTCAACGAACAACTTCATTGGAGAGTTACCTGAGTTTCTCTGTGTAAAGAAGAAACTTCAGCGACTTGTTACATTCAAAAATCGATTTTCTGGGTCTATTCCTGATGAGTATGGTAGCTGTGATTCCCTTGTTTATGTAAGAATTGAGAATAATGAATTTTCTGGTTCAGTTCCAGCGAGATTCTGGAACCTTCCGGAGCTTGATGTTGTGAAAATGGATCATAACAAGTTCGAAGGTTCAATCTCTGGTTCAATCTCTCGAGGAATCACGAAACTGATTTTATCTGCTAACAGGTTTTCCGGTGAGATTCCGGTTGGAGTCTGCAAGCTTGTTGAGCTAGTTGAATTCGATATTGGAAATAACCGGTTCAGCGGTGAAGTTCCTATCTGCATAACCGGTTTGAAAAAGTTGCAGAAGCTTGAAATGCAGGAGAATGTTTTCACCGGGGAGATTCCCGGTAATGTAACTGCCTGGACTGAATTAACCGAGCTAAACCTGTCGCATAACAGGTTCTCTGGTACAATTCCACAGGAACTTGGTAGTTTACCTGATTTAGTATACCTTGATCTCTCTGTTAACTTTTTAACAGGGAAGATTCCAGTGGAGTTAACGAACCTAAAGTTGAATCAGTTCAATGTTTCTGATAACAAATTGTCCGGTGAGGTTCCTTCCGTTTTAAACAGTCCAGTTTACTTGTCGGGTTTAACTGGTAACCCGAGTTTATGTAGCAATGTTATGAAAACCATTAGTCCTTGTTCAAAACACAAACCTTTTTCTGTTGTTGCTATAGTTGTTTTAGTTGGTTCTGTTGTGTTGATTTCCGCGTCTGTTTTGTGGTTCGTGAAGAGAAAGTCGAAGTCTTTTGTTGGAAAATCGAAACGGGCCTTTATGACAACCTCTTTTCAGAGAGTTGGGTTCAATGAGGAAGATATAGTTCCATTTTTAACCAGTGAGAATTTGATTGCAAGAGGCGGGTCGGGTTTGGTTTATAAAGTGAAGGTGAAAACAGGTCAAGTAGTTGCAGTGAAAAAACTTTGGAGTGGAAATGGAAGACAGAAACCTGAGATGGAATTGGTTTTTAAGTCTGAGATTGAAACATTGGGTAGAATTAGACATGCTAATATAGTGAAGCTTTTGTTTTGTTGTAGTTCTGATGATTTCAGAATATTGGTTTATGAGTATATGGAGAATGGGAGTTTAGGTGATGTTTTACATGAGGAAAAGTGTGATGAGTTGTTGGATTGGCCTAAGAGATTTAGAATTGCTCTCGGTGCGGCTCAAGGGTTGGCTTATTTACACCATGATTGTGTTCCTGCTATTGTTCATAGGGATGTGAAGAGTAATAACATATTGCTTGATCATGACTTTGTACCTCGGGTCGCTGATTTTGGATTAGCTAAGACATTGCAAATTCAAGGAAGTGAAGACGCTATGTCTAGAATTGCTGGTTCATGTGGTTACATTGCTCCCGAATATGGCTATACACTGAAAGTGACCGAGAAGAGTGATGTGTATAGTTTTGGCGTGGTGCTGATGGAATTAATAACCGGGAAGAGGCCAAACGACTCGTGTTTTGGTGAGAACAAAGATATTGTGAAGTGGGTCACTGAGATTGCTTTATCAACATCTCATGAAGGAGTTCAAGATTGTGTTGTGACACAGATTGTGGACCCAAGGTTGAACTTAGACACTAGTGATTATGAAGAAGTTGAAAAGGTATTGAATGTGGCTCTACTCTGTACCTCTGCATTTCCAATTAGTAGACCTTCAATGAGAAGAGTTGTGGAATTTCTTAAGGATCATAAAGTAGCTCATCCCAAGTCATGA 2928 0.3969 MEKQKLILILIFSLLCSNGNTFSLSRDYEILLHVKNTQINDQNKSLKDWLPNTQHYPCNWTGITCDSQNRSVVSIDLSEIGIYGDFPFNFCRIPSLQNLSLAVNFLGNSISSHSILPCSHLRLLNISDNLFVGNLPEFNSETFQLRVLDLSLNNFSGNIPASFGRFPQLKTLILSSNLFTGTIPSFLGNLTELTHFELTYTETMKPGSIPSELGNLTKLQFLYLSDINLVGNIPDSIGNLISIENFDLSRNSLSGEIPYTVSGMKNVKRIILFQNNLSGEIPQGLSNLTSLSLLDLSQNALTGKFSQELGSLNLSILHLNDNFLSGEVPESLALNPNLLNLSLFNNSFSGKLPRDLGKNSALRNIDVSTNNFIGELPEFLCVKKKLQRLVTFKNRFSGSIPDEYGSCDSLVYVRIENNEFSGSVPARFWNLPELDVVKMDHNKFEGSISGSISRGITKLILSANRFSGEIPVGVCKLVELVEFDIGNNRFSGEVPICITGLKKLQKLEMQENVFTGEIPGNVTAWTELTELNLSHNRFSGTIPQELGSLPDLVYLDLSVNFLTGKIPVELTNLKLNQFNVSDNKLSGEVPSVLNSPVYLSGLTGNPSLCSNVMKTISPCSKHKPFSVVAIVVLVGSVVLISASVLWFVKRKSKSFVGKSKRAFMTTSFQRVGFNEEDIVPFLTSENLIARGGSGLVYKVKVKTGQVVAVKKLWSGNGRQKPEMELVFKSEIETLGRIRHANIVKLLFCCSSDDFRILVYEYMENGSLGDVLHEEKCDELLDWPKRFRIALGAAQGLAYLHHDCVPAIVHRDVKSNNILLDHDFVPRVADFGLAKTLQIQGSEDAMSRIAGSCGYIAPEYGYTLKVTEKSDVYSFGVVLMELITGKRPNDSCFGENKDIVKWVTEIALSTSHEGVQDCVVTQIVDPRLNLDTSDYEEVEKVLNVALLCTSAFPISRPSMRRVVEFLKDHKVAHPKS 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03547 975 ProSiteProfiles Protein kinase domain profile. 682 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03547 975 SUPERFAMILY RNI-like 74 421 - -
Vivi2g03547 975 FunFam leucine-rich repeat receptor-like protein kinase TDR 762 975 - -
Vivi2g03547 975 SUPERFAMILY Protein kinase-like (PK-like) 682 965 IPR011009 -
Vivi2g03547 975 SMART serkin_6 682 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03547 975 Gene3D Ribonuclease Inhibitor 206 311 IPR032675 -
Vivi2g03547 975 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 65 311 - -
Vivi2g03547 975 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Vivi2g03547 975 Gene3D Ribonuclease Inhibitor 312 620 IPR032675 -
Vivi2g03547 975 Gene3D Phosphorylase Kinase; domain 1 667 761 - -
Vivi2g03547 975 Gene3D Transferase(Phosphotransferase) domain 1 762 974 - -
Vivi2g03547 975 FunFam Receptor-like protein kinase HSL1 313 617 - -
Vivi2g03547 975 Pfam Protein kinase domain 685 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03547 975 SUPERFAMILY L domain-like 384 610 - -
Vivi2g03547 975 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Vivi2g03547 975 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 207 358 - -
Vivi2g03547 975 Gene3D Ribonuclease Inhibitor 23 205 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03547 Vivi-Chr2 143333208 143337545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03547 27 969 Receptor kinase-like Gene Family AT5G65710 53.649 0.0 993
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi2g03547 Pkinase 7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03547 - - tpra:123909546 1546.56