Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03530 ATGATCTCTTCTCTTTCTGTTTCCGATTTCACCGTGTTAGACGAAGTTTTAACGCCATGGGATTACTCTACTGTGTTCTCGCCCTTCATTCCCACAAGCCCTAAGCTCACCTCAAGCTCCGGTTCAGGTGAACCAAACGAAAAACCGGTCTCGAACAACTCGAACCGGAACATGGAGGACCGAAAAAAGAGAAGAATGATATCGAACCGGGAATCAGCACGGAGGTCACGTATGCGTAAACAGAGACATTTAGAGAATCTACGGAACCAGTTGAACTTGTTTCGGGTTGAGAACCGGGAATTGAAGAATGGTTTGCAGTTCCTAATGTTCCACTGTGATCGTCTTCGAACCGAAAACGAGTGGCTCCGGTTAGAACGAACCGTGTTGGGTCAAAAACTGTCAAACATAAGTCAAAGTTTGGTTTTTCCACCATTCTCCTCTGCATGGCCATGCAATATTGTTACTGCGGAATGA 474 0.4578 MISSLSVSDFTVLDEVLTPWDYSTVFSPFIPTSPKLTSSSGSGEPNEKPVSNNSNRNMEDRKKRRMISNRESARRSRMRKQRHLENLRNQLNLFRVENRELKNGLQFLMFHCDRLRTENEWLRLERTVLGQKLSNISQSLVFPPFSSAWPCNIVTAE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03530 157 CDD bZIP_plant_GBF1 62 113 IPR045314 GO:0003700|GO:0006355
Vivi2g03530 157 SMART brlzneu 57 121 IPR004827 GO:0003700|GO:0006355
Vivi2g03530 157 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 59 122 IPR004827 GO:0003700|GO:0006355
Vivi2g03530 157 MobiDBLite consensus disorder prediction 34 82 - -
Vivi2g03530 157 MobiDBLite consensus disorder prediction 34 53 - -
Vivi2g03530 157 Pfam bZIP transcription factor 59 120 IPR004827 GO:0003700|GO:0006355
Vivi2g03530 157 Coils Coil 70 104 - -
Vivi2g03530 157 PANTHER BZIP TRANSCRIPTION FACTOR 44 31 141 - -
Vivi2g03530 157 Gene3D - 60 112 - -
Vivi2g03530 157 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 64 79 IPR004827 GO:0003700|GO:0006355
Vivi2g03530 157 FunFam BZIP transcription factor 59 109 - -
Vivi2g03530 157 MobiDBLite consensus disorder prediction 54 74 - -
Vivi2g03530 157 SUPERFAMILY Leucine zipper domain 61 109 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03530 Vivi-Chr2 142834366 142835239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03530 17 142 bZIP Transcription Factor Family AT3G49760 44.094 1.03e-31 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi2g03530 bZIP_1 2.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03530 - - gmx:102661188 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03530 2 142834366 142835239 Vivi1g02703 1 57927845 57928726 PCT