Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03470 ATGGAGAACTATTTGCAAGAGAATTTTGGAGGAGTCAAGTCCAAAAACTCCTCCGAAGAAGCTCTCAGAAGATGGAGAGATGTATGCGGATTCGTCAAGAATCCCAAAAGACGATTCCGTTTCACTGCAAATCTCTCCAAGAGAGAAGAAGCCGCCGCTATGCGTCGCACCAATCAGGAGAAGCTGAGGGTTGCAGTATTGGTTTCCAAAGCAGCATTTCAGTTTATCCAAGGTATGTTTTTTCAGAGCATTATTTCCATAGCTTACAAAAAATTAGAGGCAATATATTTACTTCCGATAATATCCACAGGCGCAAAACCAAGTGATTACAAAGTGCCGGAGTATGTTAAAGATGCAGGATTTCAAATCTGTGGCGATGAATTGGGGTCTATTGTAGAAGGCCATGATGTAAAGAAGTTGAAATATCATGGTAAGATTGATGGCATTGCAGAAAAACTTTGTACATCAACCACTGTTGGGATTAGCAATGAGACTGATTTACTGGATAAAAGACAAGAGATATATGGAATCAATAAATTCACTGAAAGTCAGGCTAAAAGCTTCTGGGTTTTTGTTTGGGAAGCACTTCAAGACATGACTCTCATGATACTTGGAGTGTGTGCTATTGTGTCTCTGATTGTTGGCATTGCAACAGAAGGATGGCCAAAGGGAGCTCATGATGGTCTTGGAATTGTTGCTAGTATCTTATTGGTTGTGTTTGTGACTGCAACAAGTGATTATCGTCAATCGTTACAGTTCAAAGATTTGGACAAGGAGAAGAAGAAAATTTCCATGCAGGTTACTAGAAACGGATATAGGCAGAAAATGTCTATATATGAATTACTTCCTGGCGATATCGTGCATCTTGCCATAGGTGACCAAGTCCCTGCTGATGGACTATTTGTTTCTGGATTTTCTCTGTTGATTGATGAGTCAAGTTTAACAGGAGAGAGTGAACCCGTGGTGGTGAATTCCGAAAATCCATTTCTTCTTTCAGGAACCAAGGTCCAAGATGGATCATGCAAGATGTTGATTACCACAGTTGGAATGAGGACTCAGTGGGGTAAGTTGATGGCTACTCTCAGTGAAGGTGGTGATGATGAAACCCCATTACAGGTGAAACTTAATGGAGTGGCAACCATTATTGGGAAAATAGGCCTATTCTTTGCAGTTGTCACTTTTGCTGTTCTTATGCAAGGACTTGTGAGCGCTAAACTCCAACAAGAAAGCTTCTGGAGCTGGAATGGGGATGATGCTCTGGAGATGTTGGAGTACTTTGCGATCGCAGTTACCATTGTTGTTGTGGCTGTTCCAGAAGGACTTCCATTAGCTGTGACATTGAGCCTTGCATTTGCTATGAAAAAAATGATGAACGACAAAGCCCTTGTCCGAAATTTGGCAGCATGTGAGACCATGGGATCAGCCACAACTATATGTAGTGACAAAACCGGGACACTAACAACCAATCACATGACTGTTGTGAAAACGTGCATTTGTATGAAAAGCAAGGAAGTGAGCAACAAGACTTCTACTTTGTGCTCTGAACTCCCAGAATCTTCTGTGAAACTGCTGCTACAGTCAATATTTAACAACACCGGAGGAGAGGTTGTGGTTAACAAACAAGGCAAACATGAGATTTTAGGGACCCCAACCGAGACTGCGATATTGGAATTTGGCTTGTCATTAGGTGGTGATTTTCAAGGAGAGAGACAAGCATGCAAGCTTGTTAAAGTTGAGCCATTCAACTCAACTAAGAAAAGAATGGGTGTAGTGGTGGAGCTCCCTAGTGGAGGTTTAAGAGCACACTGTAAAGGTGCTTCTGAAATAGTTCTTGCTGCTTGTGACAAAGTTCTCAATTCAAATGGCGATGTTGTCCCACTTGATGAAGAATCAATTAACCATCTTCAGACTACAATAAACCAGTTTGCTAATGAGGCACTTAGAACTTTATGCCTTGCCTATATGGAACTGGAAAATGGGTTCTCTGCCGAAGACACCATTCCTGTTACTGGATTCACTTGTATAGGAGTTGTTGGTATCAAAGATCCCGTTCGTCCTGGTGTTAAGGAGTCTGTAGCACTATGTCGTTCAGCTGGAATAACCGTGAGAATGGTTACAGGAGACAATATTAACACTGCAAAGGCTATAGCTAGGGAATGTGGGATTTTAACTGATGATGGCATAGCCATTGAAGGTCCGGAATTTAGAGAGAAGAGTTTGGAAGAGTTGCTTGTGCTGATTCCCAAAATTCAGGTTATGGCTCGATCCTCGCCTTTAGACAAACATACATTGGTGAAACACCTGCGTACCACATTTGGGGAAGTTGTAGCTGTAACTGGTGATGGAACAAATGATGCCCCGGCCCTTCATGAAGCTGACATTGGACTTGCCATGGGCATAGCTGGAACTGAGGTTGCAAAAGAAAGTGCAGATGTCATCATTCTGGATGATAACTTCTCGACAATAGTAACCGTGGCCAAATGGGGACGTTCTGTTTACGTAAATATTCAGAAATTCGTACAGTTTCAGCTTACAGTTAATGTGGTTGCTTTAATAGTGAACTTTACATCAGCCTGCTTGACAGGAACTGCTCCACTCACTGCTGTTCAACTTTTATGGGTGAACATGATAATGGACACATTGGGAGCACTTGCACTCGCAACTGAACCTCCAAATGATGATTTAATGAAGCGTTCACCTGTTGGAAGAAAAGGGAACTTCATCAGCAATGTCATGTGGAGGAACATCATGGGACAATCGCTGTATCAGTTTATGGTGATATGGTTTCTTCAGTCAAAAGGAAAATCCATCTTCGCACTTGATGGCCCCAATTCGGATCTAGTCTTAAACACACTTATCTTCAACTCATTTGTCCTCTGTCAGGTTTTCAATGAGATAAACTCACGGGAGATGGAGAAAATTAATGTTTTTAAGGGCATATTGGATAATTATGTCTTTGTGGGGGTCATCAGTGCTACAATTTTCTTTCAAATCATAATAGTCGAGTACTTGGGAACCTTTGCAAACACAACACCTCTCACTCTGGTACAATGGTTCTTCTGCTTATTTGTCGGATTTATGGGCATGCCTATTGCTGCTCGCTTAAAGAAGATTCCTGTCTGA 3123 0.4182 MENYLQENFGGVKSKNSSEEALRRWRDVCGFVKNPKRRFRFTANLSKREEAAAMRRTNQEKLRVAVLVSKAAFQFIQGMFFQSIISIAYKKLEAIYLLPIISTGAKPSDYKVPEYVKDAGFQICGDELGSIVEGHDVKKLKYHGKIDGIAEKLCTSTTVGISNETDLLDKRQEIYGINKFTESQAKSFWVFVWEALQDMTLMILGVCAIVSLIVGIATEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISMQVTRNGYRQKMSIYELLPGDIVHLAIGDQVPADGLFVSGFSLLIDESSLTGESEPVVVNSENPFLLSGTKVQDGSCKMLITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLMQGLVSAKLQQESFWSWNGDDALEMLEYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKTCICMKSKEVSNKTSTLCSELPESSVKLLLQSIFNNTGGEVVVNKQGKHEILGTPTETAILEFGLSLGGDFQGERQACKLVKVEPFNSTKKRMGVVVELPSGGLRAHCKGASEIVLAACDKVLNSNGDVVPLDEESINHLQTTINQFANEALRTLCLAYMELENGFSAEDTIPVTGFTCIGVVGIKDPVRPGVKESVALCRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFREKSLEELLVLIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALIVNFTSACLTGTAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRSPVGRKGNFISNVMWRNIMGQSLYQFMVIWFLQSKGKSIFALDGPNSDLVLNTLIFNSFVLCQVFNEINSREMEKINVFKGILDNYVFVGVISATIFFQIIIVEYLGTFANTTPLTLVQWFFCLFVGFMGMPIAARLKKIPV 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03470 1040 FunFam Calcium-transporting ATPase 796 1040 - -
Vivi2g03470 1040 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 485 688 IPR023299 GO:0000166
Vivi2g03470 1040 SFLD C1.7: P-type atpase like 461 831 - -
Vivi2g03470 1040 FunFam Calcium-transporting ATPase 17 77 - -
Vivi2g03470 1040 Pfam Cation transporting ATPase, C-terminus 864 1037 IPR006068 -
Vivi2g03470 1040 Gene3D - 168 362 - -
Vivi2g03470 1040 PRINTS H+-transporting ATPase (proton pump) signature 779 795 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g03470 1040 PRINTS H+-transporting ATPase (proton pump) signature 635 653 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g03470 1040 PRINTS H+-transporting ATPase (proton pump) signature 811 836 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g03470 1040 Pfam E1-E2 ATPase 262 457 - -
Vivi2g03470 1040 Pfam Cation transport ATPase (P-type) 539 617 - -
Vivi2g03470 1040 Gene3D - 476 824 IPR023214 -
Vivi2g03470 1040 SUPERFAMILY Calcium ATPase, transduction domain A 265 359 IPR008250 -
Vivi2g03470 1040 Gene3D - 489 683 IPR023299 GO:0000166
Vivi2g03470 1040 Pfam Cation transporter/ATPase, N-terminus 142 211 IPR004014 -
Vivi2g03470 1040 NCBIfam HAD-IC family P-type ATPase 231 505 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g03470 1040 NCBIfam HAD-IC family P-type ATPase 750 865 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g03470 1040 CDD P-type_ATPase_Ca_PMCA-like 168 912 - -
Vivi2g03470 1040 PANTHER CATION TRANSPORTING ATPASE 102 1039 - -
Vivi2g03470 1040 SUPERFAMILY HAD-like 477 884 IPR036412 -
Vivi2g03470 1040 Gene3D - 17 77 - -
Vivi2g03470 1040 FunFam Calcium-transporting ATPase 489 683 - -
Vivi2g03470 1040 ProSitePatterns E1-E2 ATPases phosphorylation site. 481 487 IPR018303 -
Vivi2g03470 1040 Gene3D - 194 1029 - -
Vivi2g03470 1040 FunFam Calcium-transporting ATPase 672 824 - -
Vivi2g03470 1040 SUPERFAMILY Calcium ATPase, transmembrane domain M 143 1039 IPR023298 -
Vivi2g03470 1040 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 50 IPR024750 GO:0005516
Vivi2g03470 1040 NCBIfam calcium-translocating P-type ATPase, PMCA-type 136 1040 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Vivi2g03470 1040 SFLD p-type atpase 461 831 IPR044492 -
Vivi2g03470 1040 PRINTS P-type cation-transporting ATPase superfamily signature 698 708 - -
Vivi2g03470 1040 PRINTS P-type cation-transporting ATPase superfamily signature 310 324 - -
Vivi2g03470 1040 PRINTS P-type cation-transporting ATPase superfamily signature 803 815 - -
Vivi2g03470 1040 PRINTS P-type cation-transporting ATPase superfamily signature 779 798 - -
Vivi2g03470 1040 PRINTS P-type cation-transporting ATPase superfamily signature 676 687 - -
Vivi2g03470 1040 PRINTS P-type cation-transporting ATPase superfamily signature 479 493 - -
Vivi2g03470 1040 FunFam Calcium-transporting ATPase 242 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03470 Vivi-Chr2 141532391 141537667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03470 1 1040 Primary Pumps ATPases AT4G37640 80.692 0.0 1719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03470 K01537 - gmx:100792691 1791.55