Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03466 ATGGGGAGTTATGTTGCCACCCCATTTTCTTTGTCTAGTCTTCTCTGCCATGAACAAACCGATTCCACATTCTTCTTTCAACAAGATGATGATGATGATGAACATGAAAACACCATCTTCATTAACTCATCACATAATATTCTTGAAGATGAAGAGGATGATGAATACATTGAATATCTATTCAAACAAGAATTAGGATTTGGTTCCTCCACCACTCATTTCTTATCCTACCATCATGATGTTGATGATGATATATTCTGGTTGAGAAATGCTCGTTTACATGCCATTGATTGGATTTTCAATACACAAGCAAAATTTGGATTCACACTCCAAACAGCTTATTTATCAATCACTTATTTCGACCGTTTTCTCTCAAAACGATCCATTGATGAATCAAAACCATGGGCTATTCAATTATTATCAGTGGCATGTTTGTCAATAGCAGCAAAAATGGAAGAACAAAGAGTTCCTCCATTATCAGAATATCCAATACAGTTTCGATTTGAGAACAAAGTGATTAAGAACATGGAGATTTTAATTTTGACTACTTTGGAATGGAAAATGGGATTACCAACACCTTTTGCTTTTTTACATTATTTCTTCACCAAGTTCTGCAATCAATATTCAAGATCAGAAACAATAATCTCAAAAGCCACACAACACATTGGAACATTGGTCAAAGATTTTAATTTGATGAATCAAAGACCATCTATAATTGCTTCTGCTTCTATATTAGCAGCTTTTGATTCTTCATTAACTCAGAAGGAAATTGATATTAAGATAAAGCTAATCTCATCATGGGGAAATATAGAAAGTGAACAAGTATTTTCATGTTACAATGTTATACAAGAAAAGAAGAGAGACAAGGTTAAGAAGACACCTTCCTCGGATTTATTATCAAAAGAGTCGAATTTGACTTATGTTGTTGAGAACAAATCTAGTGGTTTTTCAGGAGTTAAGAGAAAGCTTGGCTATGAGAATATTGAAGATTTTCAAGAACAAAAGCTACATCGACCTTAG 1020 0.3333 MGSYVATPFSLSSLLCHEQTDSTFFFQQDDDDDEHENTIFINSSHNILEDEEDDEYIEYLFKQELGFGSSTTHFLSYHHDVDDDIFWLRNARLHAIDWIFNTQAKFGFTLQTAYLSITYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQRVPPLSEYPIQFRFENKVIKNMEILILTTLEWKMGLPTPFAFLHYFFTKFCNQYSRSETIISKATQHIGTLVKDFNLMNQRPSIIASASILAAFDSSLTQKEIDIKIKLISSWGNIESEQVFSCYNVIQEKKRDKVKKTPSSDLLSKESNLTYVVENKSSGFSGVKRKLGYENIEDFQEQKLHRP 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03466 339 Pfam Cyclin, N-terminal domain 59 188 IPR006671 -
Vivi2g03466 339 SMART cyclin_7 97 182 IPR013763 -
Vivi2g03466 339 Gene3D - 89 189 - -
Vivi2g03466 339 CDD CYCLIN_AtCycD-like_rpt1 91 186 - -
Vivi2g03466 339 FunFam Cyclin-D5-1 87 189 - -
Vivi2g03466 339 SUPERFAMILY Cyclin-like 47 188 IPR036915 -
Vivi2g03466 339 SMART Cyclin_C_2 191 308 IPR004367 -
Vivi2g03466 339 Pfam Cyclin, C-terminal domain 191 286 IPR004367 -
Vivi2g03466 339 ProSitePatterns Cyclins signature. 92 123 IPR006671 -
Vivi2g03466 339 Gene3D - 190 280 - -
Vivi2g03466 339 CDD CYCLIN_AtCycD-like_rpt2 192 282 - -
Vivi2g03466 339 PANTHER CYCLINS 38 290 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03466 Vivi-Chr2 141404405 141408502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03466 10 272 Core Cell Cycle Gene Families AT4G37630 35.766 7.69e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03466 K18811 - gmx:100798140 381.333