Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03452 ATGCCTAATCATGATGAATCCATTAGTGTAGTCGTTAGAGAGTTCCAAGTTAACAAAGACACAGAAAGAGTAGTAACACTCGAAAACACATGCGAAGTTGGTCCCACTAACAAACTTTCTCTCTTCACCGATATGCTCGGTGACCCCATTTGCAGACTCCGTAACTCACCTTCCTTCCTCATGCTGGTTGCTGAAATCGGTGAAGAAATAGTTGGAATGATAAGAGGATGCATCAAAACAGTCACATGCGGTAAAAGCCTCTCAAGATCAAAAGCAACTAAACAAATTCCAGTTTACACCAAACTCGCTTACATATTAGGCCTTCGAGTTTCTCCTAATCAACGGAGAATGGGAATAGCGTTGAAGCTGGTAAAGAAAATGGAAGCGTGGTTTAAAGATAACGGCGCGGAATATTCATACATGGCAACGGAAAGTGAAAATTTAGCTTCCGTTAAACTCTTCACAGAAAAATGCGGTTATTCAAAGTTCCGTACGCCGTCAATCCTCGTTAACCCCGTTTACGCTCACAGAACTAAAATTTCAAAAAACGTTACTATCATTCCGTTAACCCCTTCAGACGCCGTTAAATTCTATCGTAACCGTTTCTCCACCACCGAGTTTTTCCCTCGCGATATTGACTCAGTTGTTAATAATAAACTCAGTCTCGGTACTTTTCTTGCCGTACCACGTGGGTTCTACGATGCTGAAACGTGGCCTGGGCCTGATAGGTTTCTGTTGGGCCCGCGTTGTTCTTGGGCCGTTTTAAGTGTTTGGAATTCTAAGGAAGTTTTTAGGTTAGAAGTACGTGGCGCGTCACGAGTGAAGCGGGCCTTTGCTAAGACGACGCGGGTTTTGGATCGGGCTTTTCCGTGGTTGAAGGTGCCGTCGGTTCCGGATTTGTTTAAGCCGTTTGGGTTTCATTTTTTGTATGGGCTTGGGGGTGAAGGCCCAAAAGTTGTTAAGATGGTTAGGGCTTTATGTGGGTTTGCCCATAATATGGCTATGGAATGTGGGTGTGGGGTTGTGGCTACTGAGGTTGCTTCATGTGAACCGCTTAGGTTTGGGATACCTCACTGGAAAATGCTATCTTGCGCTGAGGATTTATGGTGCATCAAAAGACTTGCGGAGGATTATAGTAATAACTGTGTTGGTGATTGGACTAAATCGGTGCCCGGAATCTCCATTTTTGTGGACCCTAGAGATATTTAA 1209 0.4425 MPNHDESISVVVREFQVNKDTERVVTLENTCEVGPTNKLSLFTDMLGDPICRLRNSPSFLMLVAEIGEEIVGMIRGCIKTVTCGKSLSRSKATKQIPVYTKLAYILGLRVSPNQRRMGIALKLVKKMEAWFKDNGAEYSYMATESENLASVKLFTEKCGYSKFRTPSILVNPVYAHRTKISKNVTIIPLTPSDAVKFYRNRFSTTEFFPRDIDSVVNNKLSLGTFLAVPRGFYDAETWPGPDRFLLGPRCSWAVLSVWNSKEVFRLEVRGASRVKRAFAKTTRVLDRAFPWLKVPSVPDLFKPFGFHFLYGLGGEGPKVVKMVRALCGFAHNMAMECGCGVVATEVASCEPLRFGIPHWKMLSCAEDLWCIKRLAEDYSNNCVGDWTKSVPGISIFVDPRDI 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03452 402 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 10 180 IPR000182 GO:0016747
Vivi2g03452 402 FunFam Probable N-acetyltransferase HLS1-like 19 167 - -
Vivi2g03452 402 Pfam Acetyltransferase (GNAT) family 53 160 IPR000182 GO:0016747
Vivi2g03452 402 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 20 163 IPR016181 -
Vivi2g03452 402 Gene3D - 3 171 - -
Vivi2g03452 402 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 402 - -
Vivi2g03452 402 CDD NAT_SF 61 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03452 Vivi-Chr2 141019701 141021406 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vivi2g03452 Acetyltransf_1 1.5e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03452 - - gmx:100800613 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03452 2 141019701 141021406 Vivi2g03452 2 141019701 141021406 ECH
Vivi2g03452 2 141019701 141021406 Vivi1g02738 1 58785214 58787139 PCT