Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03432 ATGGCAATGTCACATTTCATCCCAAAGTTGATGTTATTGTGTATGTTGATGTTGTTATATGTTGATGATATTGTTGGAACACATGTGAATGTTACCAACTCTTTGAAAGGAAACTTAAATTTAACCCTTCATTGCAGATCGGGAGATCCAGGGAGTCATGATCTTGGAGTTCATGTTCTTAAACCTGGTACTACTTTTGGTTGGAATACTAGTTTTGAAGTTGATGGAAGATATTACCCCTGCAAATTTCAATGGAATAGTGAAACACATTATTATGTTATATATAGAGTTGATAGAGATCTATCAACTTGTAGATATAATTGTAATTGGAATATTACAGAATCAGGGCCATGTAAGGTTCTATCTTCCAATAAATTGGTTTGCGATTCTTGGGATCCATAG 402 0.3408 MAMSHFIPKLMLLCMLMLLYVDDIVGTHVNVTNSLKGNLNLTLHCRSGDPGSHDLGVHVLKPGTTFGWNTSFEVDGRYYPCKFQWNSETHYYVIYRVDRDLSTCRYNCNWNITESGPCKVLSSNKLVCDSWDP 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03432 133 PANTHER - 27 119 IPR010264 -
Vivi2g03432 133 Pfam Plant self-incompatibility protein S1 28 122 IPR010264 -
Vivi2g03432 133 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 34 99 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03432 Vivi-Chr2 140614152 140614553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03432 27 132 Carbohydrate Esterase AT3G16970 31.579 3.94e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03432 - - vvo:131650171 287.73