Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03423 ATGAACAGCACCGTTTCGTCGTGCTACGTCGTCGTTTTGAAGTTTCGGAGTATCAGAGAACATGGCTTCAGTAGTTCTTCTGAATCAGTTTGGACAGATTATCCCATAGAGAACGCGTACGAGCTCTTAGAAGTATCTGAAACAAGCTCATTTGCTGAGATCAAAGCGTCGTTTCGCAAATTGGCTAAAGAAACTCACCCGGACCTCGCTGAGTCAAGGAACGATTCCACTGCTTCTCGACGATTTGTTCAAATCCTTGCCGCATATGAGATTCTTTCAGATTCTAGGAAGAGAGCCCATTATGACATGTACTTGTCATCTCAGAAAAAGCTTATGCATAAGCATTCTGAACAGGGTTCAAAATTGCGCATTTACCAGGCACAGGCTACGACATTCAAGGAGATGGAAGTTGTTGAATGGTTAAAGTGGTACAGACTAGCTATAAATGATATTTTGTTGGAGAAGAAAGTGGTGGTTGGAACAGGATATTTTGATGTACTCGAGAGAGATTTTTATTCTGCTATTCATGCAGCATATTATGGTCCCGAAATTGATTCTATTCCCATGGAGCTTCTTCCTGACTGTTTTGAGGCTGAGGAGAGGTCCTCTCATGAAACTCCCGAGGTTTTGCACTTGGTTTCAGGCCGTGATCTTTTTGGGATGGTTTGCCTAGTCAACATGATTCCAGAGATATCATATACTGAAAATGAAAAGTTGACTTCTTATAGATCATTCCATTCAGGCCTCTGTCAATCCATAATGGATGTGAACGCCCACAGGAATATGGAAAGGCCAGATGATTTTGGAACTGAACAGGGTCACAGCTCTAAAATTTCAAGTAATGTATCAGATGCATATAGAGATCTGGAATTACACGTCTCTGGAAAATTAGTTGCCACGGCATCTAGGGTCCTACCAGTACCTGGATGTTGTTCTGGTGCGATGCAAAAAGAAGATGCTGAAGATCTTATCCATGTGTACCTTAATTTGGATGAAGATCCCAAACATATCAACAGTGGCTTTTCTAGAAATTTATTTGCAAACAGCACAGTTGGAAGCAGAATGCATTTGGGAACCATATCTGGACTTGGCAGTAGTCCAGATGAGGGATGTTGTGATGTCTACAACAGCAGTCGTGAAAAGACTCATGTAATTATGAAACATAGGACATTAATGGTGAAGCATATGCACTGGTATCATGTGGGTAATAATAACGTTTCAGTATGTGAGTGTAGATGCACCAGAGCACGTTTACCACCAAGCAAATTTTGGCTATTTGAGCCTCGATGTGGCTTCCATGACATAGGGGGTTGGTATGTTGAAACATATGGCAAAGAGAAGGGTCGCACTATGCCATCACAAAGATTCTGGGATGGCTTGGATTATAGCGAGCAAGCTGAAAGAAGACTTCATCCAGCAATGTATCTGTTTGCTCTTGCATATCGAACACTTGATCTTGAATATGCCAAAACAAGCAAGAAAACATTTAGGAATGCTGTTGGAGCACATATGTTCCGAATACTCCACTGGTGCAGAAAACTTGCTCAATAG 1551 0.4172 MNSTVSSCYVVVLKFRSIREHGFSSSSESVWTDYPIENAYELLEVSETSSFAEIKASFRKLAKETHPDLAESRNDSTASRRFVQILAAYEILSDSRKRAHYDMYLSSQKKLMHKHSEQGSKLRIYQAQATTFKEMEVVEWLKWYRLAINDILLEKKVVVGTGYFDVLERDFYSAIHAAYYGPEIDSIPMELLPDCFEAEERSSHETPEVLHLVSGRDLFGMVCLVNMIPEISYTENEKLTSYRSFHSGLCQSIMDVNAHRNMERPDDFGTEQGHSSKISSNVSDAYRDLELHVSGKLVATASRVLPVPGCCSGAMQKEDAEDLIHVYLNLDEDPKHINSGFSRNLFANSTVGSRMHLGTISGLGSSPDEGCCDVYNSSREKTHVIMKHRTLMVKHMHWYHVGNNNVSVCECRCTRARLPPSKFWLFEPRCGFHDIGGWYVETYGKDXKGRTMPSQRFWDGLDYSEQAERRLHPAMYLFALAYRTLDLEYAKTSKKTFRNAVGAHMFRILHWCRKLAQ 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03423 517 SMART dnaj_3 37 97 IPR001623 -
Vivi2g03423 517 Pfam DnaJ domain 38 102 IPR001623 -
Vivi2g03423 517 CDD DnaJ 38 94 IPR001623 -
Vivi2g03423 517 ProSitePatterns Nt-dnaJ domain signature. 82 101 IPR018253 -
Vivi2g03423 517 ProSiteProfiles dnaJ domain profile. 38 105 IPR001623 -
Vivi2g03423 517 SUPERFAMILY Chaperone J-domain 30 106 IPR036869 -
Vivi2g03423 517 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 11 515 - -
Vivi2g03423 517 Gene3D DnaJ domain 31 126 IPR036869 -
Vivi2g03423 517 PRINTS DnaJ domain signature 58 73 IPR001623 -
Vivi2g03423 517 PRINTS DnaJ domain signature 40 58 IPR001623 -
Vivi2g03423 517 PRINTS DnaJ domain signature 77 97 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03423 Vivi-Chr2 140355630 140362600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03423 40 106 C2H2 Transcription Factor Family AT1G74250 41.429 4.15e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03423 - - gmx:100805332 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03423 2 140355630 140362600 Vivi2g03423 2 140355630 140362600 ECH