Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03395 ATGGAATTCAACTTTCTTATCTACATCATTTTCCCTCTTCTTGTTTTCATCACTACAAAACTTTTATTATTCTCCCAAAAAACATTCAAAAAACTTCCACCAAACTTACCCTCTCTTCCTATAATTGGCAACCTCCATCAAATTAAACTACCAATTCACCACTACTTTCACAACCTCTCCCAAAAATATGGCCCAATCTTCACCCTTAAATTCGGTTCTCGCCTCGTAGCTGTTGTTTCATCTCCATCTCTAGCCGAAGAATGTTTCACCAAAAACGACATCGTTTTCGCAAACCGTGTACAGTCTCTCAAAACCAAGTACCTTGCTTTCAACAGCACAAACGTAATATCATCATCATATGGAGATCATTGGCGAAACTTACGTCGTATATGCTCAATCGAAATCCTCTCCAATCACCGTCTCAACTCCTTTTCAGATATCCGAAAAGACGAAACCATGAGGCTAATCCAAAAGCTAGCTGAAAACTCTCAAAAAGATTTCGCAAAAGTTGAGCTTAGAACTTTGTTTTCTGAACTAACGTTTAACATCATCATGAGAATGGTTTGTGGTAAACGGTTTTACGGTGATGAATCTGATGAGGCAAAGAAGTTTAGAGATATCATGAACGAGATACAACAGTTTGGGTTAGGGTCTAAGCTTGGTGAATTTGTGCCTTTATTTAGATTTTTTGATTTTAGTGGTCATGAGAAGAATTTGAAAAAGGTTGGGGAGAAGATGGATGCACTTTTTCAAGGACTAGTTGATGAACACCGTAGGGATGGAAATGAAAATAAGAATACAATGATTGATCATCTACTTTCTTTGCAACAATCACAGCCTGATTATTACAGTGATCAAATTATCAAAGGCCTTATTATGGCGTTGATAGTTGCGGGAACAGAAACTTCCGCTATAACGTTAGAGTGGGCTATGGCTAATTTATTAAACCATCCAGAAATATTGGAAAAAGCAAAAATTGAATTGGAGAATCATATTGGACAAGAGAGTTTAATTGAAGAAGGTGAAGCTACCAAATTACAATATCTTCAAAACATCATCTCTGAGACTCTAAGATTACATCCAGCGGCACCAATGTTGTTGCCACATGTATCATTGGAAGATTGTACTGTGGGAGGATTTGATGTGCCACGTAACACCATGTTGATGGTGAACGCGTGGGCTATTCATAGGGATTCTGATTTATGGGCTGACCCGTCGAGCTTTAAGCCCGAGAGGTTTGAGAGTAATCGACAAGCAGACATGCATGGGTTTATGCCTTTTGGGATGGGGAGGAGGGCTTGTCCTGGGTCGGGCTTAGCTTTGAGAACTTTGGGCTTGACTTTGGGCTCGTTGATCCAATGCTTTGAGTGGAAAAGGATTGGTGAAGAAGAAGTTGACATGAGTGAAGGACGCGGAACTCTTGTGCCTATGGCTGTTCCATTGGAGGCACAATGCAAAGCTCGTCCAATAATCAATCAAATGTTCTCTTAA 1491 0.3977 MEFNFLIYIIFPLLVFITTKLLLFSQKTFKKLPPNLPSLPIIGNLHQIKLPIHHYFHNLSQKYGPIFTLKFGSRLVAVVSSPSLAEECFTKNDIVFANRVQSLKTKYLAFNSTNVISSSYGDHWRNLRRICSIEILSNHRLNSFSDIRKDETMRLIQKLAENSQKDFAKVELRTLFSELTFNIIMRMVCGKRFYGDESDEAKKFRDIMNEIQQFGLGSKLGEFVPLFRFFDFSGHEKNLKKVGEKMDALFQGLVDEHRRDGNENKNTMIDHLLSLQQSQPDYYSDQIIKGLIMALIVAGTETSAITLEWAMANLLNHPEILEKAKIELENHIGQESLIEEGEATKLQYLQNIISETLRLHPAAPMLLPHVSLEDCTVGGFDVPRNTMLMVNAWAIHRDSDLWADPSSFKPERFESNRQADMHGFMPFGMGRRACPGSGLALRTLGLTLGSLIQCFEWKRIGEEEVDMSEGRGTLVPMAVPLEAQCKARPIINQMFS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03395 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Vivi2g03395 496 PANTHER CYTOCHROME P450 82C3-RELATED 14 488 - -
Vivi2g03395 496 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03395 496 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03395 496 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03395 496 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03395 496 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03395 496 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03395 496 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03395 496 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03395 496 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03395 496 Pfam Cytochrome P450 33 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03395 496 SUPERFAMILY Cytochrome P450 33 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03395 496 Gene3D Cytochrome P450 25 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03395 496 CDD CYP81 64 481 - -
Vivi2g03395 496 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03395 496 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03395 496 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03395 496 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03395 496 FunFam Cytochrome P450 family protein 24 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03395 Vivi-Chr2 139067514 139069456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03395 1 496 Cytochrome P450 AT4G37370 54.150 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03395 K13260 - gmx:100804509 672.93