Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03373 ATGACCGTTCAACTCATCATGGAATACTACACTAACCACACTTTACCAAACAAATTCCAAAAGAATGATGCAGTTGAAGAAGCTGCTTCTGGTTTAGAAACCATAGAAAAGCTCATAAAGTTACTATCACCACCACAATCATGTTCTCCAAATGCAGAGCCTAGTTCCATGGACTCAGTTGAAACCGTTGCTAACGTAGCCGTTTCGAAGTTTAAGAATGTTGTTTCACTTCTGAGTCGAAACCGGACGAGAACTGGTCACGCTCGTTTCAGAAGAGCGCCTTTGCCTTCTGAAACTATAGTCTACCGTGCTACTCCGTTGCAGCAGATTCCTCCTCTTATTGGCCCCACGAATGAAGCTGCTGAGAAAAACAAGATTATTGATTTCTCTTATTCATCTGCTAATAATTCGTTCATGTCTTCTGTCACCGGTGATGCTGTACATGTTTCTTCTTCATTGGGAAAGCCTTGTGTTTCGTCGTGTTCGTTGAAGAGAAAGTGTGAGTCTGAGAATTTTGGTTCTGGAAAGTGTGGTAGTTCCTCTAGAAACTGTCATTGTTCAAAGAAGAGAAAAATGAGGTTGAAAAGAGTGGTGAGAGTAGCGGCAATAAGCTTGAAGATGGCAGATATTCCAACGGATGACTATTCATGGAGAAAGTATGGGCAGAAACCAATTAAAGGATCACCTTATCCAAGGGGCTATTACAAGTGCAGCAGTGTTAAAGGATGTCCAGCACGCAAACATGTAGAAAGGGCTTTGGATGATCCATCTATGTTGGTGGTTACTTATGAAGGAGAACACAATCACTCACTCTCTACTATTGAAGCTAGTAGTAATAATCTCCTCCTAGAATAG 855 0.4152 MTVQLIMEYYTNHTLPNKFQKNDAVEEAASGLETIEKLIKLLSPPQSCSPNAEPSSMDSVETVANVAVSKFKNVVSLLSRNRTRTGHARFRRAPLPSETIVYRATPLQQIPPLIGPTNEAAEKNKIIDFSYSSANNSFMSSVTGDAVHVSSSLGKPCVSSCSLKRKCESENFGSGKCGSSSRNCHCSKKRKMRLKRVVRVAAISLKMADIPTDDYSWRKYGQKPIKGSPYPRGYYKCSSVKGCPARKHVERALDDPSMLVVTYEGEHNHSLSTIEASSNNLLLE 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03373 284 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 25 275 IPR044810 GO:0003700
Vivi2g03373 284 Pfam WRKY DNA -binding domain 213 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g03373 284 Pfam Plant zinc cluster domain 164 209 IPR018872 -
Vivi2g03373 284 Gene3D WRKY domain 197 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g03373 284 FunFam WRKY transcription factor 65 195 272 - -
Vivi2g03373 284 SMART WRKY_cls 211 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g03373 284 SUPERFAMILY WRKY DNA-binding domain 208 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g03373 284 ProSiteProfiles WRKY domain profile. 206 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03373 Vivi-Chr2 138715032 138716508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03373 18 275 WRKY Transcription Factor Family AT2G24570 41.987 4.03e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi2g03373 WRKY 1.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03373 - - vvo:131646899 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03373 2 138715032 138716508 Vivi2g03373 2 138715032 138716508 ECH
Vivi2g03373 2 138715032 138716508 Vivi1g00652 1 14080140 14081691 PCT
Vivi1g02824 1 61252205 61254136 Vivi2g03373 2 138715032 138716508 PCT