Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03367 ATGAAGAAGAATTTGAATCTGGAACTTGGCCTTTTCACTCCTTCCATTACTTCCAATTTTCCTACCTCAGTGGCAGAAGAATCGCAATATCAACCGCAGCAGCACCGGCCTTTGACCATTGTCTATGATGGCAAGGTTTGCGTTTCTGATGCCACTGAGAATCAGGCCAGGTCAATTTTAATGCTAGCAAATAAAGAAATGGAGGAAAGAGTGAGGACACCAACTGGATCGTTTTCAGAGCCATCTTCACCAGCAATATTTACTAGTAACTTGTATAGCCCTGGAACTTCTCTTTCCATGAAAAAATCACTGCAGAGGTTTCTCCAAAAGAGGAAAAATCGGATTCAAGAAGCATCACCTTACCATTTTAATGAGCAAAATTGA 384 0.4115 MKKNLNLELGLFTPSITSNFPTSVAEESQYQPQQHRPLTIVYDGKVCVSDATENQARSILMLANKEMEERVRTPTGSFSEPSSPAIFTSNLYSPGTSLSMKKSLQRFLQKRKNRIQEASPYHFNEQN 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03367 127 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 19 122 IPR040390 -
Vivi2g03367 127 ProSiteProfiles Tify domain profile. 31 65 IPR010399 -
Vivi2g03367 127 SMART tify_2 31 65 IPR010399 -
Vivi2g03367 127 Pfam tify domain 33 64 IPR010399 -
Vivi2g03367 127 Pfam Jas motif 101 121 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03367 Vivi-Chr2 138613564 138616026 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03367 1 122 Tify Gene Family AT1G30135 43.411 6.42e-20 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vivi2g03367 tify 1.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03367 - - gmx:100305565 154.451