Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g03355 | ATGTGGAATCTGAATGACTCACCCGATCAGAGAAAAAACTACGAATCAGAAGGATGTTCAATCGAGGGTGAAGAAGTTGATGAAAAAGGAAAGAGAGTTGGATCTGTTTCGAATTCAAGTTCATCTGTAGTTGTTATAGAAGATGGATCGGAAGAAGAAGGTAACGATAACAGCAATAACAGTAACGGTAACGGAAACGGTAACGGAGTGTTGAGGAAACGAACTAGTAAGATTTTCGGATTCTCAATGGATGACAGTGACGACAGTCCGCCGGTGACTAGACAGTTTTTTCCGGTGGAGGATTCTGAGGTGACAGCGGTGGTTGATTCTCCTTCCGGTGGCGGCGGTGTGGTTGGTTCTTCTTTTCCACGTGCTCACTGGGTTGGTGTGAAGTTTTGTCAATCGGAGACAGTTAACGGTGGGAAATCGGTTGAAGCGTCGTCGCAACCGATTAAGAAGAGTCGTCGGGGACCGAGGTCAAGAAGTTCGCAGTATAGAGGTGTTACTTTTTACCGACGAACAGGTCGATGGGAATCTCATATATGGGATTGTGGAAAACAAGTGTATTTGGGTGGATTTGACACGGCACATGCAGCTGCTCGTGCATATGATAGAGCTGCAATTAAGTTTAGAGGAGTGGAAGCGGATATAAATTTCAATATAGAAGATTATGAAGAGGATTTGAAGCAGATGAGCAATTTAACAAAGGAAGAGTTTGTGCATGTGCTTCGGCGACAAAGCACTGGATTTCCGAGAGGGAGTTCGAAATATAGAGGTGTAACTTTGCATAAATGTGGAAGATGGGAGGCTCGAATGGGTCAATTCTTAGGCAAAAAGTATGTTTATTTGGGTTTGTTTGACACCGAGATTGAAGCTGCAAGGGCATATGATAAAGCAGCAATAAAATGCAATGGTAAAGAGGCTGTTACCAATTTTGATCCCAGCATCTATGATAATGAGCTTAATACTACTACTGAATCCTCGGGTAATGCCGCGGAGCATAATCTGGATTTAAGTTTGGGTAATTCAAGTTCTAAAGGTAATAATAGTCAAGCATTTGTTACTGATCAGCATATGGCACCTGAATCAAATTGGCGGAATGGTGGAATCAGGCCTAAACCGGTAAATATACTTCCAAGACCATGTGGTGTAAGTAACATGGAAGGCTATGCAAGGGATGTGTATGGAGAGAGCGAAGCCTTGCGGATGTTAAGCCAAACTCATCTTCAATCTCCCGTCACTAATGAAATGCATAGATATGGTCCCTACCGGTCACCTGTTGAACAACACTACCCTCAAATGCTTCACAGTTTTCCACATCTTCACCCCTCAAATTTTCATGTAGGTATCGATCAGCAGCAGCAGCAACGGAGGCCGAATTGGAAGCGACTTATCATTATCAATGTCGGAACAACAAAAATGGCAAACTGGGCCGCCACATTTGTTAGCAACTGCTGCTGCAGCATCATCAGGATTCCCACCTCAGATAACAAGACCCTCTTCTTCTTCTTCTTCTCAAGGTTGGCTGCAGAAAAATGGGTTCCACACACTCATGAGACCCTCTTGAACCTTCAAAACTATTTCAACCTTGCCATTTTTAATTCACATTTAAATAATCTTCTCTTATTGCTATTATTTTTTTCTTTCTCTTGA | 1653 | 0.4277 | MWNLNDSPDQRKNYESEGCSIEGEEVDEKGKRVGSVSNSSSSVVVIEDGSEEEGNDNSNNSNGNGNGNGVLRKRTSKIFGFSMDDSDDSPPVTRQFFPVEDSEVTAVVDSPSGGGGVVGSSFPRAHWVGVKFCQSETVNGGKSVEASSQPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYDNELNTTTESSGNAAEHNLDLSLGNSSSKGNNSQAFVTDQHMAPESNWRNGGIRPKPVNILPRPCGVSNMEGYARDVYGESEALRMLSQTHLQSPVTNEMHRYGPYRSPVEQHYPQMLHSFPHLHPSNFHVGIDQQQQQRRPNWKRLIIINVGTTKMANWAATFVSNCCCSIIRIPTSDNKTLFFFFFSRLAAEKWVPHTHETLLNLQNYFNLAIFNSHLNNLLLLLLFFSFS | 550 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g03355 | 550 | MobiDBLite | consensus disorder prediction | 10 | 32 | - | - | |
Vivi2g03355 | 550 | SMART | rav1_2 | 256 | 319 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g03355 | 550 | SMART | rav1_2 | 164 | 226 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g03355 | 550 | PRINTS | Ethylene responsive element binding protein signature | 257 | 268 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g03355 | 550 | PRINTS | Ethylene responsive element binding protein signature | 295 | 315 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g03355 | 550 | FunFam | AP2-like ethylene-responsive transcription factor | 163 | 222 | - | - | |
Vivi2g03355 | 550 | SUPERFAMILY | DNA-binding domain | 255 | 315 | IPR016177 | GO:0003677 | |
Vivi2g03355 | 550 | Gene3D | AP2/ERF domain | 255 | 314 | IPR036955 | GO:0003700|GO:0006355 | |
Vivi2g03355 | 550 | Gene3D | AP2/ERF domain | 163 | 222 | IPR036955 | GO:0003700|GO:0006355 | |
Vivi2g03355 | 550 | MobiDBLite | consensus disorder prediction | 139 | 164 | - | - | |
Vivi2g03355 | 550 | CDD | AP2 | 255 | 315 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g03355 | 550 | SUPERFAMILY | DNA-binding domain | 163 | 221 | IPR016177 | GO:0003677 | |
Vivi2g03355 | 550 | ProSiteProfiles | AP2/ERF domain profile. | 256 | 313 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g03355 | 550 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 88 | 393 | - | - | |
Vivi2g03355 | 550 | MobiDBLite | consensus disorder prediction | 55 | 71 | - | - | |
Vivi2g03355 | 550 | Pfam | AP2 domain | 164 | 212 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g03355 | 550 | Pfam | AP2 domain | 255 | 304 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g03355 | 550 | CDD | AP2 | 164 | 221 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g03355 | 550 | FunFam | AP2-like ethylene-responsive transcription factor | 255 | 315 | - | - | |
Vivi2g03355 | 550 | MobiDBLite | consensus disorder prediction | 324 | 349 | - | - | |
Vivi2g03355 | 550 | ProSiteProfiles | AP2/ERF domain profile. | 164 | 220 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g03355 | 550 | MobiDBLite | consensus disorder prediction | 1 | 72 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g03355 | Vivi-Chr2 | 138385163 | 138389270 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g03355 | 1 | 351 | AP2-EREBP Transcription Factor Family | AT4G36920 | 66.575 | 1.07e-132 | 391 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-AP2 | Vivi2g03355 | AP2 | 3.9e-10 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g03355 | K09284 | - | gmx:100786333 | 614.764 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vivi2g03355 | 2 | 138385163 | 138389270 | Vivi2g03355 | 2 | 138385163 | 138389270 | ECH | |
Vivi2g03355 | 2 | 138385163 | 138389270 | Vivi1g02836 | 1 | 61483656 | 61486934 | PCT |