Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03348 ATGGCGTCGAACACTCCGCCTCCGCCTTCCCGGACGTCGTCTTCTAGATCCGAGCCTCCTCTCGATCCTTCCACAACAAAAATGGAGGATACTGGTCCTGCGGTGAAAGAAGTGTTATCGGTTATTGAATCTTTGAAGAAACAAGTTGCTGCCAAACGGATTGTTTCGGTCAAGAATAGAGTGGAGGAAAATAGACAGAAGCTGGCTGGTATTACTAACCAGCTCTGGAAATCGGCGGAGGAGAGAAAGACGTGTGACGTTGCGGATACGGATAAAAGTCTGGATCTGTTGACTAAGAGGCAACAAGAAGCGATTGATATGCATAATGGTGTTTGTGCTGGTAATGATGATGGCGAGAACAATGGTAATCATGGAGATGACCATGGTTCTACGGCAGTTCTTCTAGGATCTAATGTTGCTGTAAAGAATGCTGTTCGGCCTATCAAATTACCCGAAGTAAGGAGATTGCCGCCTTACACCACATGGATTTTTCTGGACAGAAATCAAAGAATGACAGAGGATCAATCGGTTTTAGGTCGGAGGCGAATTTATTATGATCAAAATGGTGGCGAAGCACTTATTTGCAGTGACAGTGAGGAGGAACTAATTGATGAAGAAGAGGAAAAAAGAGAATTTGTAGAACCAGAAGATTTTATACTTCGCATGACTATCAGCGAATTTGGTTTATCTGAGGCTGTTTTGGAGTCACTGGCTCAGTGTTTTTCTAGAAAAACTAGTGACATTAAGGCCAGATATGAAACTTTTTGCAATGAAGACAATGCTGGCGGGGACTCTAAAAATGGAGATGCACAAGATAATTCTCAAATTGACAATTCTTTTCTGGAAAAGGATCTTGAAGCAGCTCTTGACTCTTTTGACAACCTCTTTTGTCGCCGATGCCGTGTTTTCGATTGCAGGTTACATGGATGCTCCCAAGATCTTGTATTTCCGGCTGAGAGGCAACCTCCCTGGAATCCTCCTAATACTGAAAATGCACCATGTGGGCCAAATTGTTTCAGATCGGTACTTAAGACAGAAAAAATGCCGAAAGTCACATCTTCTACTCAGACTGATGTTGAAGACAAATCCTCAGGCAGTGTTCTATCTAGGAAAAAGTCTTCTGGTAGAAGGCGAATAAAATGCAGCCAAAGTGAAAGTGCTTCATCTAATGCTAAGAACATATCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACGGGATGCTATTTCAGCTTCCCACTCAGCTCCACCTAAAGCTAAGTCAGTAGGGAAAAGTGGAAAAAGTAAGAGAAACAGTAAACGAGTGGCCGAACGCGTTCTAGTTTGCATGCAGAAACGGCATAAGAAAACAGTAGCTTCTGATTCTGATTCCATTAGTGAAGCTCCTGACCGCCCATCGAATGATTTGGTTTCTGAACCACATGTCATGAGTGGGGAAGACAACACAAGGAAAGAAGAGTTTGTGGATGAAAACATTTCTAAACAAGAAATGACAGATAATAAATCTTGGAAAGCTCTTGAAAAAGGGCTTTTAGAAAAAGGAATGGAGATTTTTGGCAAAAACAGCTGCTTAATAGCTAGGAATCTCTTTAATGGTCTAAAGACATGCTGGGATGTTTTCCGGTACATAAATTGTGAAGAAGGGAAGTTGTCTGGTTCTACTGGGGATACTGTGAATTCTCTTGTGGAAGGCTATTCCAAGGGTAATAATGATGTGAGAAGAAGATCAAAATTTTTACGTAGAAGAGGAAAAGTCCGTCGTTTAAAGTATACCTGGAAATCTGCCGCTTATCATTCAATCAGGAAAAGGATTACAGAAAGAAAGGATCAGCCCTGCCGACAGTACAACCCATGTGGATGCCAATCAGCTTGTGGAAAGGAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAGTACTGTGGATGTCCCAAGAGTTGCAAAAACCGATTTCGTGGCTGTCATTGTGCGAAGAGTCAATGCCGAAGTCGTCAATGTCCATGCTTTGCTGCAGATAGGGAATGTGATCCGGATGTTTGTAGAAACTGTTGGGTCAGCAGCTGTGGCGATGGCACTCTTGGGATTCCTAGTCAAAGAGGGGATAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAAGGTTCTTCTTGGACGGTCTGATGTGTCTGGCTGGGGAGCATTCTTAAAGAATAGCGTTGGTAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTAATTTCTCACAGGGAAGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCATATCGAAAGGGTGATAAATTGAAGTTTGCAAACCACTCGCCTGTTCCAAATTGTTATGCGAAGGTTATTATGGTTGCTGGAGATCATAGGGTAGGAATATTTGCCAAGGAGCGGATTAATGCTGGGGAGGAGCTGTTTTATGATTACCGCTATGAACCCGATAGAGCTCCCGTTTGGGCTAGGAAACCAGAGGCACCTGGATCGAAAAAAGAAGACGGTGCTCCTTCAAGTGGTCGGGCAAAGAAGCTTGCTTAA 2598 0.428 MASNTPPPPSRTSSSRSEPPLDPSTTKMEDTGPAVKEVLSVIESLKKQVAAKRIVSVKNRVEENRQKLAGITNQLWKSAEERKTCDVADTDKSLDLLTKRQQEAIDMHNGVCAGNDDGENNGNHGDDHGSTAVLLGSNVAVKNAVRPIKLPEVRRLPPYTTWIFLDRNQRMTEDQSVLGRRRIYYDQNGGEALICSDSEEELIDEEEEKREFVEPEDFILRMTISEFGLSEAVLESLAQCFSRKTSDIKARYETFCNEDNAGGDSKNGDAQDNSQIDNSFLEKDLEAALDSFDNLFCRRCRVFDCRLHGCSQDLVFPAERQPPWNPPNTENAPCGPNCFRSVLKTEKMPKVTSSTQTDVEDKSSGSVLSRKKSSGRRRIKCSQSESASSNAKNISESSDSENGPGRDAISASHSAPPKAKSVGKSGKSKRNSKRVAERVLVCMQKRHKKTVASDSDSISEAPDRPSNDLVSEPHVMSGEDNTRKEEFVDENISKQEMTDNKSWKALEKGLLEKGMEIFGKNSCLIARNLFNGLKTCWDVFRYINCEEGKLSGSTGDTVNSLVEGYSKGNNDVRRRSKFLRRRGKVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKECPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSSCGDGTLGIPSQRGDNYECRNMKLLLKQQQKVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPVPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPVWARKPEAPGSKKEDGAPSSGRAKKLA 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03348 865 FunFam Putative histone-lysine N-methyltransferase EZH2 615 833 - -
Vivi2g03348 865 ProSiteProfiles CXC domain profile. 601 701 IPR026489 -
Vivi2g03348 865 MobiDBLite consensus disorder prediction 840 858 - -
Vivi2g03348 865 MobiDBLite consensus disorder prediction 380 407 - -
Vivi2g03348 865 CDD SET_EZH 716 832 - -
Vivi2g03348 865 MobiDBLite consensus disorder prediction 346 482 - -
Vivi2g03348 865 MobiDBLite consensus disorder prediction 347 363 - -
Vivi2g03348 865 SMART set_7 716 837 IPR001214 GO:0005515
Vivi2g03348 865 MobiDBLite consensus disorder prediction 840 865 - -
Vivi2g03348 865 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 865 IPR025778 GO:0031519
Vivi2g03348 865 MobiDBLite consensus disorder prediction 1 24 - -
Vivi2g03348 865 Gene3D SET domain 615 833 IPR046341 -
Vivi2g03348 865 MobiDBLite consensus disorder prediction 430 454 - -
Vivi2g03348 865 SUPERFAMILY SET domain 589 836 IPR046341 -
Vivi2g03348 865 MobiDBLite consensus disorder prediction 1 33 - -
Vivi2g03348 865 ProSiteProfiles SET domain profile. 716 831 IPR001214 GO:0005515
Vivi2g03348 865 Pfam CXC domain 653 684 IPR041355 -
Vivi2g03348 865 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 31 863 IPR045318 GO:0006338|GO:0042054
Vivi2g03348 865 Pfam SET domain 727 830 IPR001214 GO:0005515
Vivi2g03348 865 SMART CXC_2 649 686 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03348 Vivi-Chr2 137950289 137957247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03348 705 834 C2H2 Transcription Factor Family AT2G23740 27.891 7.47e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi2g03348 SET 2.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03348 - K11430 gmx:100809840 1427.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03348 2 137950289 137957247 Vivi2g03348 2 137950289 137957247 ECH