Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g03345 | ATGAAAATACGCTACATATTTAAGAAGTTATCAAGAATATCTCATCAATTCCGTTTAGTTAACTGGAATGAAGACAACAGCCCAACTCGTGATGCTAGAACTCTAAGATATTTGATGGATTCTAATTCTCCTTCGTCGTTTGCTTTCAACAATCGCATAGGATTGATTGGGACTAGAGATCAAACTATACCTCTTCACACAAATCCAACAAACAATACTACTAGCCATACTATAAATGGGAATTATCATCCAACAATCACCAACATTAGTAACTATAATGATAATCAAACTTCTCCTTCTCCTCACTCGTCTCCGCCGAAACTCTTTGGTTCATCTCTCATTTTAGCTCCTACTATCAGAAGAAGTACTGTTCAGTATATAAATACAACACAACCATCATCTATGAATTCAAATATGACCCAACTTGGGACAGCTGGATCAAATTTTCATCAAGTTCAAAGTAGAACAACAAATAATAATAATGGTATTTCTACTTCATTTAATAATGGTATAAATAACGACGTTGTTGCATCTGCTACTATTACTTCTACTAGTACTAGTAATGGCTTTCTCAAAAGAAGTAGATCATCAGAGTTTGTGAGAGGAGAGAGTTCGAATCAAGGTTCACAAGTTGGTGCCTTAAGAAGACGCACAAATCCTCCTCCTCATAGTTTCCAACATGAAACTATGAACAATAATATCATGTCTTCGACTCAATTATCAATGCATTACAACTACAATGGTAATAGTGGGTTTTCAAGTATGGTGCCGCAACAAGTGAACCATCATGGTGTAAGTGCAACACAAAATTCTATTATAGATGATTCTCACATAAATAATCGACGTCATGCACATGCTAGTCCGATAAGTTTTTTTGATGATACACCGTCATATAATAGCCCATATGAATATATCATTGATGATAATGTTGCTTGCTTAATATTTCCTTCTCAACAAGAGATTGCTCGAGAAAACTTCACCATGACCCGAAGAACTGAACCTACATCTACTTCTACCTCTACAACATCTTTATATCCTTCCGCAATGACAGGAGGATCAACTCAGGTTACAGTGAGTACATCACCATTTCAAAGAAATAATAATTTCTTGTCTTTTGGAGCCGATTCATCTTTATCCTCCCATAATCCAAGGGATATATTTGATTCTATTGAACAAAGATCTGATGATACATTCATTCAAAGCACCATAAATGTTCAACAATATGTAAGGTTTTTACCAGAAGGCCAGGGGAATAGATTTCTGGCTCCATCTACTGTTCACGTGTGGTCTAATAATTTTGTACCACGATGGCCACAACGACATTCTAATCCTTCAACAAGTGGTTATAACCTAAACCCTCCCCCATCCCATAATGGACCAAGGTTTAGTACTGCTGTTGAATATGATCAATACATGCAGTCTGATATAATACCGACTAGATCGAGGAATCGTCGTCGCAGTAATAACCGCATTTTCACCTCAACTTCACGTGAACATAGGGCTCAGAGGAACAGGCACAGGGATGAGGTGTTTTTGGCACTCGAGGAACGCATGAGGGCTGAGGCCAGACTCACTGAAGAGCAGATCCACAAATATATTGAAACAGAAACATATGTGTCAAATCCAATTGAAACCAGTACACAAAACGAAACATGCACAATCTGTCAGGAAGACTATGTGGAAGGCGAAATTATTGGAAGACTGGATTGCAAGCACCTATATCATCTTGAATGCATCAAACAATGGTTGTTGAAAAAGAATACTTGTCCAATTTGTAAGAAAATAGCTTTAGATGTTCACGAAGATGAGGATGATAATGTCATATAA | 1827 | 0.3711 | MKIRYIFKKLSRISHQFRLVNWNEDNSPTRDARTLRYLMDSNSPSSFAFNNRIGLIGTRDQTIPLHTNPTNNTTSHTINGNYHPTITNISNYNDNQTSPSPHSSPPKLFGSSLILAPTIRRSTVQYINTTQPSSMNSNMTQLGTAGSNFHQVQSRTTNNNNGISTSFNNGINNDVVASATITSTSTSNGFLKRSRSSEFVRGESSNQGSQVGALRRRTNPPPHSFQHETMNNNIMSSTQLSMHYNYNGNSGFSSMVPQQVNHHGVSATQNSIIDDSHINNRRHAHASPISFFDDTPSYNSPYEYIIDDNVACLIFPSQQEIARENFTMTRRTEPTSTSTSTTSLYPSAMTGGSTQVTVSTSPFQRNNNFLSFGADSSLSSHNPRDIFDSIEQRSDDTFIQSTINVQQYVRFLPEGQGNRFLAPSTVHVWSNNFVPRWPQRHSNPSTSGYNLNPPPSHNGPRFSTAVEYDQYMQSDIIPTRSRNRRRSNNRIFTSTSREHRAQRNRHRDEVFLALEERMRAEARLTEEQIHKYIETETYVSNPIETSTQNETCTICQEDYVEGEIIGRLDCKHLYHLECIKQWLLKKNTCPICKKIALDVHEDEDDNVI | 608 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g03345 | 608 | MobiDBLite | consensus disorder prediction | 194 | 214 | - | - | |
Vivi2g03345 | 608 | MobiDBLite | consensus disorder prediction | 480 | 505 | - | - | |
Vivi2g03345 | 608 | MobiDBLite | consensus disorder prediction | 194 | 229 | - | - | |
Vivi2g03345 | 608 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 511 | 596 | IPR013083 | - | |
Vivi2g03345 | 608 | MobiDBLite | consensus disorder prediction | 439 | 458 | - | - | |
Vivi2g03345 | 608 | SMART | ring_2 | 552 | 592 | IPR001841 | - | |
Vivi2g03345 | 608 | MobiDBLite | consensus disorder prediction | 491 | 505 | - | - | |
Vivi2g03345 | 608 | ProSiteProfiles | Zinc finger RING-type profile. | 552 | 593 | IPR001841 | - | |
Vivi2g03345 | 608 | MobiDBLite | consensus disorder prediction | 330 | 355 | - | - | |
Vivi2g03345 | 608 | Pfam | Ring finger domain | 551 | 593 | IPR001841 | - | |
Vivi2g03345 | 608 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 88 | 597 | IPR045191 | GO:0061630 | |
Vivi2g03345 | 608 | SUPERFAMILY | RING/U-box | 551 | 597 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g03345 | Vivi-Chr2 | 137819605 | 137822210 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g03345 | 497 | 597 | C3H Transcription Factor Family | AT2G15530 | 42.857 | 1.33e-19 | 91.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g03345 | - | - | vvo:131650147 | 1161.36 |