Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03309 ATGGATTGGGTTCGCGGTGGTACGCTAGGTAGTGGAAGCTTCGCCACTGTCTATTTAGCCACACACACAAAACAATCTCTTAACTTTCCGTCTATCACCGCCGTCAAATCCTCCGAAAACTACACCTCACATTTTCTTCAAAAGGAGAAACACATACTAGATTGTTTAGGTTCATCTCCACATATTATCAAGTGTTTTGGTCACGATTTTACTTTTGAAAATGGCGAAGACTGTTATAATATATTTCTTGAATATGCCGCCAGTGGAACACTTTCCGATCAACTAAAGAATCACGGAGGAAAGTTTTCGGAAACTCTCATTCGCCGTTACACAAGGTCTGTTTTAGAAGGACTTAAACACATTCATGAAAACGGTTTTGTTCATTGTGTCATAAAGCTAGAAAACATTCTTGTATTCGACAACGGAAATGTTAAGATTTCAGATTTTGGTCTAGCAAAGGAGACAGGTTTAGAACATGGTGAGAAGAAGTTGGAATTCAGAGGAACTCCTATATTTATGGCGCCGGAGTCGGTTAACGATAGCGTTTATGAATCTCCGGTGGATATTTGGGCTCTTGGTTGCGCCGTCGTGGAAATGATTACCGGTAAACCGGCATGGATTATGAGTAGCAAGGAAAATATGTGGTCGTTGATGATTCGTATTGGGATTGGAAAAGAATTACCGTTGATTCAAGATGAATTATCAGAAGAAGGCAAAGATTTTCTTAAAAAGTGTTTTGTTAAAGATCCTATGAAAAGATGGAGTGCTGAGATGCTATTGAAACACCCTTTTATTTCTGATGATGATGAAACTGTTTTATCTATGAAAGAGTTGTCATTGCCATTAATGTCTCCAAGAACTCACTTTGATTTTATAATATAA 882 0.3821 MDWVRGGTLGSGSFATVYLATHTKQSLNFPSITAVKSSENYTSHFLQKEKHILDCLGSSPHIIKCFGHDFTFENGEDCYNIFLEYAASGTLSDQLKNHGGKFSETLIRRYTRSVLEGLKHIHENGFVHCVIKLENILVFDNGNVKISDFGLAKETGLEHGEKKLEFRGTPIFMAPESVNDSVYESPVDIWALGCAVVEMITGKPAWIMSSKENMWSLMIRIGIGKELPLIQDELSEEGKDFLKKCFVKDPMKRWSAEMLLKHPFISDDDETVLSMKELSLPLMSPRTHFDFII 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03309 293 CDD STKc_MAPKKK 2 265 - -
Vivi2g03309 293 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Vivi2g03309 293 Pfam Protein kinase domain 6 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03309 293 ProSiteProfiles Protein kinase domain profile. 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03309 293 Gene3D Transferase(Phosphotransferase) domain 1 2 287 - -
Vivi2g03309 293 SUPERFAMILY Protein kinase-like (PK-like) 3 286 IPR011009 -
Vivi2g03309 293 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03309 Vivi-Chr2 135902838 135905748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03309 1 291 MAP Kinase Kinase Kinase AT3G50310 53.000 1.58e-109 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi2g03309 Pkinase 4.2e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03309 - - cam:101502416 413.69