Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03306 ATGGATTGGATTCGCGGTCGTTTGCTAGGTAGTGGAAGCTTCGCCAATGTCTACTTAGCCACACACACAAAACATTCGGTTAACTTTCCGTCTATCACCGCCGTCAAATCCTCCGAAAACTACACCTCACATTTACTTCAAAAGGAGAAACATATACTAGATCGTTTAGGTTCATCCCCACATATTATCAAGTGTTTTGGTCACGATTTTACTTTTGAAAATGGCGAAGACTATTATAATATATTCCTTGAATATGCCGCCGGCGGAACACTTTCTGACCAGCTCAAGAATCACGAAGGCAAGTTCTCGGAAACTCTCGTTCGCGGTTACACGAGGTCTGTTTTAGAAGGACTTAAACACATTCACAAAAACGGTTTCGTTCATTGCGACTTGAAGCTAGAAAACATTCTTGTATTCGAACGTGGAAATGTTAAGATTTCAGATTTTGGTCTTGCAAAGGAGAAAGGTTTAGAACATGGTGAGAAGAAGTTGGAGTTTAGAGGAACTCCTATATTTATGGCGCCGGAGTCAGTTAACGATAGCGTTTATGAATCTCCGGTGGATATTTGGGCTCTTGGTTGCGCCGTCGTGGAAATGATTACCGGTAAACCATCATGGATTATGAGTAGCAAGGAAAATATGTGGTCGTTGATGATTCGTATTGGGATTGGAGAAGAATTACCATTGATTCCACATGAATTATCAGAAGAAGGCAAAGATTTTCTTAAAAAGTGTTTTGTTAAAGATCCTATGAAAAGATGGAGTGCTGAGATGCTTTTGAAACATCCTTTTATTTCTTATGATGAAACTGTTTTATCTTTGAAAGAGTTTTCATTGCCATTAATGTCTCCCAGAACTCACTTTGATTTTATTCAATGGGCTTTTTCTACTGTGAAGACTTTACCGACGAAGAGACTCCAACAATTAGTTACATAG 936 0.391 MDWIRGRLLGSGSFANVYLATHTKHSVNFPSITAVKSSENYTSHLLQKEKHILDRLGSSPHIIKCFGHDFTFENGEDYYNIFLEYAAGGTLSDQLKNHEGKFSETLVRGYTRSVLEGLKHIHKNGFVHCDLKLENILVFERGNVKISDFGLAKEKGLEHGEKKLEFRGTPIFMAPESVNDSVYESPVDIWALGCAVVEMITGKPSWIMSSKENMWSLMIRIGIGEELPLIPHELSEEGKDFLKKCFVKDPMKRWSAEMLLKHPFISYDETVLSLKEFSLPLMSPRTHFDFIQWAFSTVKTLPTKRLQQLVT 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03306 311 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Vivi2g03306 311 ProSiteProfiles Protein kinase domain profile. 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03306 311 SUPERFAMILY Protein kinase-like (PK-like) 3 299 IPR011009 -
Vivi2g03306 311 Pfam Protein kinase domain 6 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03306 311 CDD STKc_MAPKKK 2 265 - -
Vivi2g03306 311 Gene3D Transferase(Phosphotransferase) domain 1 2 292 - -
Vivi2g03306 311 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 267 - -
Vivi2g03306 311 SMART serkin_6 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03306 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03306 Vivi-Chr2 135876121 135877056 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03306 1 311 MAP Kinase Kinase Kinase AT4G36950 50.769 2.41e-110 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi2g03306 Pkinase 5e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03306 - - cam:101502416 409.453