Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03298 ATGGATTGGGTTCGTGGTCGTATGCTAGGTAGTGGAAGCTTCGCCACTGTCTACTTAGCCACACACACAAAACATTCGGTTAACTTTCCGTCTATCACCGCTGTCAAATCCTCTGAAAACTACACCTCACATTTTCTTCAAAAGGAGAAACATATACTGGATCGTTTAGGTTCATCCCCACATATTATCAAGTGTTTTGGTCACGATAATACTTTTGAAAATGGCGAAGACTGTTATAATATATTTCTTGAATATGCCGCCGGTGGAACACTTTCCGACCGGCTCAAGAATCACGGAGGCAAGTTCTCGGAACCTCTCGTTCGCAGTTACACGAGATCTGTTTTAGAAGGACTTAAACACATTCACGAGAACGGTTTCGTTCATTGCGACTTGAAGCTAGAAAACATTCTCGTATTCGACAATGGAAATGTTAAGATTTCAGATTTTGGTCTTGCAAAGGAGAAAGGTTTAGATCATGGTGAGAAGAAGTTGGAATTCAGAGGAACTCCTATATTTATGGCACCGGAGTCGGTTAACGATAGTGTTTATGAATCTCCGGTGGATATTTGGGCTCTTGGTTGCGCCGTCGTGGAGATGATTACCGGTAAACCATCATGGATTATGAGTAGCAAGGAAAATATGTGGTCGTTGATGATTCGTATTGGGATTGGAGAAAAATTACCGTTGATTCCAGATGAATTATCAGAAGAAGGCAAAGATTTTCTTAAAAAGTGTTTTGTTAAAGATCCAATGAAAAGATGGAGTGCTGAGATGCTTTTGAAACATCCTTTTATTTCTTATGATGAAACTGTTTTATCTTTGAAAGAGTTTTCATTGCCATTAATGTCTCCAACAACTCACTTTGATTTTATTCAATGGGCTTTTTCTACTGTGAAGACTTTACCGACGGAGAGACTCCAACAATTAGTTACATAG 936 0.3942 MDWVRGRMLGSGSFATVYLATHTKHSVNFPSITAVKSSENYTSHFLQKEKHILDRLGSSPHIIKCFGHDNTFENGEDCYNIFLEYAAGGTLSDRLKNHGGKFSEPLVRSYTRSVLEGLKHIHENGFVHCDLKLENILVFDNGNVKISDFGLAKEKGLDHGEKKLEFRGTPIFMAPESVNDSVYESPVDIWALGCAVVEMITGKPSWIMSSKENMWSLMIRIGIGEKLPLIPDELSEEGKDFLKKCFVKDPMKRWSAEMLLKHPFISYDETVLSLKEFSLPLMSPTTHFDFIQWAFSTVKTLPTERLQQLVT 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03298 311 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Vivi2g03298 311 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 269 - -
Vivi2g03298 311 ProSiteProfiles Protein kinase domain profile. 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03298 311 Pfam Protein kinase domain 5 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03298 311 SMART serkin_6 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03298 311 CDD STKc_MAPKKK 2 265 - -
Vivi2g03298 311 Gene3D Transferase(Phosphotransferase) domain 1 2 292 - -
Vivi2g03298 311 SUPERFAMILY Protein kinase-like (PK-like) 2 299 IPR011009 -
Vivi2g03298 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03298 Vivi-Chr2 135814054 135814989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03298 1 311 MAP Kinase Kinase Kinase AT3G50310 50.307 3.76e-112 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi2g03298 Pkinase 4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03298 - - cam:101502416 418.698