Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03274 ATGACCACCACCAACACCCCCTCCTCCTCCCTACAACTCACCCTTTCCTCACCTCAAAAAAAACCCCAACCCATCCCATGGACCCACCAAGAAACCCTCAACCTCATCCGAGCCTACCAAGAAAAATGGTACTCCCTCAAACGTGGCCCGCTCCGCGGCACCCAATGGGAAGAGGTTGCCGTTGTCGTAGCCGCCCGATGCGGTTACGATTACAATCACCCTTCCAAAACCGCCCTCCAATGTCGTCATAAGATGGAAAAACTCCGTCAGCGTCACCGATCCGAAAAGCACCGCCTCATCGCCACTTCCTCCGCTGCCTCTTCCCGATCCTGGCAGTATTTCCGTCTCATGGACGATCTTGAACGCGGTCCTCTCCCTATCTCCGCTCGAGCTATTCCTCACGAGTACAACAACTATAGCAACGGTGAGAGAGGGAAAAATCATCAGAATCAGAGTGGTAGGTCAAGGAGTATTCATAATATTCTTCACCAGAAACCCTCGGTGGTTGATGATGATGATGATGAGGAGGAAGAGGAAGGAGCGATGGCGACGGAGTTGACGGCGGAGTTAAGGAGTTTTGCGGAGAGTATAATTGGATTGGAAAATATGAAAATGGAGATGATGAAGGAAACAGAGAGGTTTAGGTTAGAGATGGAGAATAAGAGGATGAGAATGATACTTGAATCTCAGTGGAGGATTATTGATTCCATTGGAAGGGTATTTGGATCTTCCTAA 735 0.4939 MTTTNTPSSSLQLTLSSPQKKPQPIPWTHQETLNLIRAYQEKWYSLKRGPLRGTQWEEVAVVVAARCGYDYNHPSKTALQCRHKMEKLRQRHRSEKHRLIATSSAASSRSWQYFRLMDDLERGPLPISARAIPHEYNNYSNGERGKNHQNQSGRSRSIHNILHQKPSVVDDDDDEEEEEGAMATELTAELRSFAESIIGLENMKMEMMKETERFRLEMENKRMRMILESQWRIIDSIGRVFGSS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03274 244 Gene3D - 27 94 - -
Vivi2g03274 244 ProSiteProfiles Myb-like domain profile. 26 89 IPR001005 -
Vivi2g03274 244 MobiDBLite consensus disorder prediction 1 26 - -
Vivi2g03274 244 Pfam Myb/SANT-like DNA-binding domain 26 120 IPR044822 -
Vivi2g03274 244 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 15 235 IPR044823 -
Vivi2g03274 244 MobiDBLite consensus disorder prediction 140 162 - -
Vivi2g03274 244 MobiDBLite consensus disorder prediction 136 180 - -
Vivi2g03274 244 FunFam Trihelix transcription factor ASIL2 27 94 - -
Vivi2g03274 244 SMART 118neu2 34 125 IPR006578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03274 Vivi-Chr2 135289715 135290796 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03274 27 120 Trihelix Transcription Factor Family AT3G14180 30.851 3.79e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi2g03274 Myb_DNA-bind_4 4.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03274 - - vvo:131652193 439.113