Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03235 ATGGGTCTCTGCACTTCAAAACCCTCTTCAAACCCCACTCACTCCTCTAACAAATTTAACACCAATGAAACAAACTCCGTCACAGTTAACGTCACTTCCCAACCTCAAACAAACTCCGTCAATGGCGGAAACCCTAACGAAACCGAAAACGGTAAGAAATCTCCGTTTTTCTCTTTCTACACTCCCAGTCCGGCTCATCAGTTCTTCTCTAAGATGTCTCCGGCGAGGAAATTTTTCAACCGGCCGTTTCCTCCGCCGTCTCCGGCGAAGCATATAAAGTCGCTTCTGGCACGGCGGCATGGCTCGGTGAAGCCTAATGAAGCTTCGATACCGGAAAGGGGTGAGGAGGAGACGGTGGTTGCGCTTGATAAGAATTTCGGATTCTCGAAGCATTTTGGAAGTAAGTATGATCTTGGAGATGAGGTTGGGAGAGGGCATTTTGGTTATACTTGTGCTGCGAAGTTGAAGAAAGGAGATCTTAAAGGTCAACAAGTTGCTGTTAAAGTCATTCCTAAAGCCAAGATGACATCTGCTATTGCTATTGAGGATGTGAGAAGGGAAGTGAAAATACTGAAAGCTTTGAATGGACATAAGAATCTAGTACGATTCTATGATGCTTATGAAGATCATGATAATGTCTATATAGTAATGGAATTGTGCGAAGGTGGAGAGCTGTTGGACAGAATATTATCAAGAGGTGGCAAATACACAGAGGAAGATGCAAAAGCTATCCTTAGACAAATACTGAATGCTGCTGCATTTTGCCATCTACAGGGTGTTGTGCATCGTGATCTTAAACCAGAGAACTTCTTGTTTGCAACCAAGGATGAAAACTCAGAACTGAAGGCCATAGATTTTGGGCTGTCAGATTTTGTTAAACTAGATGAAAGGTTGAATGATATTGTGGGTAGTGCATACTATGTGGCTCCTGAAGTTCTTCATAGAGCTTATAGTACTGAGGCTGATGTCTGGAGTATTGGAGTGATTGCCTATATTTTATTATGTGGCAGCCGTCCATTTTGGGCTCGGACTGAGTCTGGCATCTTTCGTACTGTATTGAAAGCTGATCCAAGTTTTGACGAACATCCCTGGCCTTCTCTATCAGATGAGGCAAGGGATTTTGTTAAGAGCTTACTAAATAAAGATCCACGGAAAAGAATGAGTGCAGCACAGGCATTAAGTCATCCATGGATAAAAAACTATGAGGATACGGAAGTACCTTTGGATATTTTAATATTCAAGCTCATGAAGGCATACATGCGCTCTTCTTCCCTACGAAAAGCTGCTTTAAGGGCTTTGTCTAAGACATTAACTGTGGATGAGCTGATTTATTTGAAGGAGCAGTTTGCACTTTTAGAGCCTAACAAAAATAGCACCATTAGCTTGGAAAATATAAAAACGGCCTTTATGGTCAATGCAACAGATGCTATGAAGGAGTCACGCATTGCCGACTTTCTTGCATCACTTAATGCATTGCAATATAAAAGGATGGATTTTGATGAGTTCTGCGCAGCTGCACTTAGTGTTCATCAACATGAAGCACTTGACCATTGGGAGAAGCGTGCACGTTGTGCCTTTGATTTATTTGAAAAGGATGGAAACAAGGCCATAGTCATTGACGAATTAGCTTCGGAACTGGGGCTTGGCCCATCTATCCCGGTACATGCTGTTCTTCATGATTGGATTCGTCACACTGATGGGAAATTAAGCTTCCTTGGATTTGTGAAGTTGTTGCATGGCCCATCAAGAAGTCTTGCAAAAGCTCAATAG 1770 0.4249 MGLCTSKPSSNPTHSSNKFNTNETNSVTVNVTSQPQTNSVNGGNPNETENGKKSPFFSFYTPSPAHQFFSKMSPARKFFNRPFPPPSPAKHIKSLLARRHGSVKPNEASIPERGEEETVVALDKNFGFSKHFGSKYDLGDEVGRGHFGYTCAAKLKKGDLKGQQVAVKVIPKAKMTSAIAIEDVRREVKILKALNGHKNLVRFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAILRQILNAAAFCHLQGVVHRDLKPENFLFATKDENSELKAIDFGLSDFVKLDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRTVLKADPSFDEHPWPSLSDEARDFVKSLLNKDPRKRMSAAQALSHPWIKNYEDTEVPLDILIFKLMKAYMRSSSLRKAALRALSKTLTVDELIYLKEQFALLEPNKNSTISLENIKTAFMVNATDAMKESRIADFLASLNALQYKRMDFDEFCAAALSVHQHEALDHWEKRARCAFDLFEKDGNKAIVIDELASELGLGPSIPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKAQ 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03235 589 Gene3D Transferase(Phosphotransferase) domain 1 225 410 - -
Vivi2g03235 589 Gene3D Phosphorylase Kinase; domain 1 129 224 - -
Vivi2g03235 589 FunFam CDPK-related kinase 1 434 507 - -
Vivi2g03235 589 FunFam CDPK-related kinase 1 129 224 - -
Vivi2g03235 589 SMART serkin_6 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03235 589 PANTHER SERINE/THREONINE-PROTEIN KINASE 122 564 - -
Vivi2g03235 589 MobiDBLite consensus disorder prediction 1 56 - -
Vivi2g03235 589 FunFam Calcium-dependent protein kinase SK5 308 403 - -
Vivi2g03235 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Vivi2g03235 589 Gene3D - 417 580 - -
Vivi2g03235 589 CDD STKc_CAMK 135 397 - -
Vivi2g03235 589 Pfam Protein kinase domain 137 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03235 589 SUPERFAMILY EF-hand 426 580 IPR011992 -
Vivi2g03235 589 FunFam CDPK-related kinase 3 128 300 - -
Vivi2g03235 589 SUPERFAMILY Protein kinase-like (PK-like) 133 427 IPR011009 -
Vivi2g03235 589 ProSitePatterns Protein kinases ATP-binding region signature. 142 168 IPR017441 GO:0005524
Vivi2g03235 589 ProSiteProfiles Protein kinase domain profile. 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03235 Vivi-Chr2 134146604 134150768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03235 1 589 EF-hand Containing Proteins AT3G50530 71.900 0.0 917
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vivi2g03235 Pkinase 3.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03235 K13412 - gmx:100794177 962.214