Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03233 ATGCGTTGGTTGCCAACCCTAATTTTCTCTCCTTCCTCTTCTCATTCTTCCCACGTTTCATCATCTTCTTCTTCGACTTCTTCGTCTTCGTCTTCTCTTACATCTCCTTCCACGTTAAAATATTCTCCTTCTTCTTCCTCTTCCGATACTCGGAAACCTTCACGCGGCACGTGGTTTTTCGGTAACGGTAGGAAATCCACGCGGTCGAGGAAGCTTCGACACGTCGACGATGTTCACATTGAATACGACGTTGCTGCAGCGCCTATTTCTCGTTCCCCGAGCGCACGGAGCTATATGCGGTCTAATACTTCTTCCTCCGTTGCGCCTCAGCCGTTGCCGTTGCCAGAGTTAGCTTCTCCGGCAGGGTTGCAAAGGAATAAGGATGGTGATCGTCGTTTGCCGTCGCCTAAAGAAGCCTCTGGTAGAGCCATTGAATCTGATGCACATGCCGTCGTTTCTCTTCCCACCGGATTTAAGATGAGGAGTGTTTTTGCTAGCCGAGAGTCGAGAAGAAATACGGAGCAAATGGAGACAAAGCCGCATGGGAATATGATAGCGCGTCAAGATACAAGTGGTGCTGCAACTCCTAGCTTTCGAGAAAATAGCTTCCGGATAAGTGTTCCTCCAAGGAGTGCTTCAAGCAGTCCCTTTACCAGTCCCACAACAAGCAAAACCAAACATGATGATTTTGTGCCATATTATTATGTGTCACCTAAAGCAAATCAGTTCTGGTCTGCACCAGAAATGCCAACATCTACCGGACAACCACCTCCTGCTTTCTTTGATTTATCTGGGTTAGGTATTGATTCTGCTTCTTCTCCCCATCAAGGTTCAGGAGGAAAAAGTCCCAAACAACAAAACCCTTCTTCACCCCTACCAAGGTTGTCCCTCGACTACCCAACAACTTCACGTCGCGAGAGTCTTGGTCCTCCTCTCAGTGTTCATCCTTTACCCTTGCCTCCTTGGTCTGGGAGTTCCTTACCTTCACCCTCTGCTAACTTTCCCCAACCTGGGGGAGCTAAGACAGAATCTATATCTATGAAAAGTCAATGGCAAAAGGGTAAACTTATAGGGCGAGGTACTTTTGGAAGTGTTTATGTTGCCACTAATAGAGAAACTGGAGCATTGTGTGCAATGAAGGAAGCAGAAATATTTTCTGATGATCCAAAATCTGCAGAGAGTATAAAGCAGTTAGAACAGGAAATTAAAGTTCTTAGCCATCTGAAACATCCAAACATTGTGCAGTATTATGGTAGTGAAATAGTAGAAGACAAGTTTTATATTTATTTGGAGTTTATCCATCCTGGTTCAATAAATAAATATGTCCGTGACCACTGTGGCGCGATAACAGAATCCGTTGTTCGGAATTTCACACGGCATATTCTTTCAGGGTTGGCTTACTTGCACAGCAAAAAGACAATTCATAGGGATATCAAAGGGGCTAACTTGCTTGTTGATTCTTCTGGTGTTGTTAAGCTAGCTGATTTTGGGATGGCCAAGCATCTAACTGGGCATTCTGCTGACCTGTCTTTGAAAGGAAGTCCATACTGGATGGCTCCAGAGCTTATGCAAGCGGTCATGCATAAAGACAACAACTCTGATCTAGCTTTTGCTATTGATATTTGGAGTTTGGGTTGTACAATTATTGAAATGTTCACGGGGAAGCCTCCTTGGAGTGAATACGAAGGAGCCGCAGCTATGTTTAAGGTAATGAAGGATACTCCTCCTATACCTGAAACATTGTCATCTGAAGGTAAAGATTTCTTGAGGCTTTGCTTTAAAAGAAATCCAGCAGAGCGGCCAACTGCTTCAATGTTATTAGAGCATCGGTTTCTGAAAAACGTACAGCATTCAGATCCTTCATCTTCCGCCCATCTGTATAATGGAACAACTTCAATGGATAATTCCCATAGTCCCAGAGGGTTATATGAAAGCAAACCTGATCAGTTTTCTATTGTCAGTGCACAGATCGCAAAAGGGAAATTTTGCACTGAGAGTGGCATAGCAATGTCCCACTCGCTCTACTCTTGA 2031 0.4441 MRWLPTLIFSPSSSHSSHVSSSSSSTSSSSSSLTSPSTLKYSPSSSSSDTRKPSRGTWFFGNGRKSTRSRKLRHVDDVHIEYDVAAAPISRSPSARSYMRSNTSSSVAPQPLPLPELASPAGLQRNKDGDRRLPSPKEASGRAIESDAHAVVSLPTGFKMRSVFASRESRRNTEQMETKPHGNMIARQDTSGAATPSFRENSFRISVPPRSASSSPFTSPTTSKTKHDDFVPYYYVSPKANQFWSAPEMPTSTGQPPPAFFDLSGLGIDSASSPHQGSGGKSPKQQNPSSPLPRLSLDYPTTSRRESLGPPLSVHPLPLPPWSGSSLPSPSANFPQPGGAKTESISMKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEAEIFSDDPKSAESIKQLEQEIKVLSHLKHPNIVQYYGSEIVEDKFYIYLEFIHPGSINKYVRDHCGAITESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGHSADLSLKGSPYWMAPELMQAVMHKDNNSDLAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPPIPETLSSEGKDFLRLCFKRNPAERPTASMLLEHRFLKNVQHSDPSSSAHLYNGTTSMDNSHSPRGLYESKPDQFSIVSAQIAKGKFCTESGIAMSHSLYS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03233 676 MobiDBLite consensus disorder prediction 7 64 - -
Vivi2g03233 676 FunFam Mitogen-activated protein kinase kinase kinase 5 348 649 - -
Vivi2g03233 676 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524
Vivi2g03233 676 MobiDBLite consensus disorder prediction 246 342 - -
Vivi2g03233 676 ProSiteProfiles Protein kinase domain profile. 351 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03233 676 MobiDBLite consensus disorder prediction 91 148 - -
Vivi2g03233 676 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 16 625 - -
Vivi2g03233 676 MobiDBLite consensus disorder prediction 618 641 - -
Vivi2g03233 676 MobiDBLite consensus disorder prediction 1 71 - -
Vivi2g03233 676 MobiDBLite consensus disorder prediction 326 342 - -
Vivi2g03233 676 SUPERFAMILY Protein kinase-like (PK-like) 346 639 IPR011009 -
Vivi2g03233 676 MobiDBLite consensus disorder prediction 618 639 - -
Vivi2g03233 676 MobiDBLite consensus disorder prediction 269 308 - -
Vivi2g03233 676 SMART serkin_6 351 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03233 676 MobiDBLite consensus disorder prediction 125 144 - -
Vivi2g03233 676 MobiDBLite consensus disorder prediction 94 110 - -
Vivi2g03233 676 MobiDBLite consensus disorder prediction 205 224 - -
Vivi2g03233 676 Gene3D Transferase(Phosphotransferase) domain 1 347 642 - -
Vivi2g03233 676 MobiDBLite consensus disorder prediction 166 196 - -
Vivi2g03233 676 Pfam Protein kinase domain 352 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03233 Vivi-Chr2 134085366 134090179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03233 55 629 MAP Kinase Kinase Kinase AT5G66850 56.501 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi2g03233 Pkinase 1.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03233 - - psat:127120353 1171.76