Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03219 ATGGTAGTTTCTGTTGAGTTCATATGTTTTCGTTTCATCGAATATTCTAAAACATTCAATTCAACAATAACATCAAAACCACAAGATCACTTTCATTGTTGCAGCCACAAGAGTAGCATAGCCATGGCGGATCTACTGAGCGGAGGTGCAGTTGGAGCAGTAATGGGAGAAATGGTGAAATACACTCTTCAAAAAATCAAAAAGGGTCGAGAATTCCGTCCAACACTCGAAACAAACATAGAAACCTTAAAAGCTTTGGCTCCTCTAGTAGAAGAAATGAAAGGTTACAACGATTTGTTGGATCGACCAAGAGGAGAGATAGAGAGGCTAGAGAAACGCATAAGAGAAGGTGAAGAGCTTGTTAAAAAATGCAAGAAGCTTACTCTATGGAACTTTTTCTCTTTTCCAGGTTACCAAGGTAAGCTTCAGAAGAAAGACAAGGAGCTTCAGAGAGATTTGTCTGTTAATGTTCAACTTGAGAATAAAAGGGATTTGATTGTGCTTTCTGCTAAGGTGGATGGAATTTTGGATGTTTTGACCAGAATGATGAATTCTGGTCAGTTTGAAGGGAATCAGATTAGGGGTTTGTGTGGTGCTCCGGAAGAGCCGGAGTGTTTGGGAATGGTTGAGGCTTTGAATAAGTTGAAGATTGAATTGATGAAAGATGGTGTTGATGTGCTTGTTTTGACTGGTTTGGGTGGTTCTGGTAAAAGTACTCTTGCTAAGAAGCTTTGTTGGCATCCACAAATTAAAGGCAAGTTTGGTGGAAACATCTTCTTTGTTACTGTCTCAAAAAATCCCAACTTGAAGAACATTGTACAGACACTATTTGAACATTGTGGATGTCGTGTGCCTGAGTTTCAAACCGATGAAGAGGCAATTAACCGATTGGGACTTCTTATGAGGCAAGTTGGCAGAATTCCAATACTGTTAGTCTTGGATGATGTTTGGCCTAACTCAGAAGGCCTTGTGGAGAAGTTCAAATTCCAAATGAAAGATTATAAGATTTTGGTGACTTCAAGAGTTGCATTTAGAAGATTTGGATCCCCGTGCCAGTTGGATCCACTTGATCATGGTCCTGCAGTGTCTCTTTTCCGTCACTTTGCTCAATTGAATCACAAAAGCTCATACATGCCTGAGAAAAAACTTGTTCGCGAGATAGTGAGAGGCTGTAAGGGTTCGCCGCTGGCGCTTCAGGTCATTGCTGGATCACTTTGTAAGCAGCCTTCTGAGAAGTGGCAAAATATGAAAGAGTTTTTGCAAAGTCAATCCATTCTGGAGTTGAATAGCACTAACTTGCTTTGTTTCCTTCAACAAAGCTTGGATATATTGGAGGATATCAATCAAAAAGAGTGCTTCATGGATATGGGACTATTTCCCGAAGACCAGAGGATTCCTGTTACTGTCCTCATTGATATGTGGGCAGAACTGTATAATTTAGATGAAGATGGTACAAAAGCAATGGCCATTGTTCATGATTTAATCACCAGGAATTTGATTAATGTCATAGCTACAAGGAAAGTTGCAACAGAAACAGACAAGTACTACAATAACCACTATGTCATGATGCATGATCTCCTCAGAGAGCTAGCAATTCATCAGAGCAAAGGGGAACCAATTGAACAGAGAAAAAGACTGATCATTGACTTAAATGGAGATAATCGTCCTGATTGGTGGATAGGACCGAATCAGCAAGGACTCATTAGTCGTGCGTACTCGTTCATCTCCGGAATGTTTGTAAAACCGATACAACTAAAAGTTGACGCCCGCGTATTGTCTATATCAACTGATGAAACATTTTCTTCGGATTGGTGTGACATGCAACCTGATGAAGCTGAGGTTATGGTTTTAAATCTTCGGTCTGACAAGTACTCATTACCAGATTTCACAGAGAAAATGTGGGAACTAAAAGTTTTAATAATCACAAATTATGGTTTCAATTATTCTGAATTAACCAAGTTTGAGCTACTTGGTTTTTTATCAAACCTGAAAAGAATAAGGTTGGAGAAGGTTTCAGTCCCTTGTCTATGCAAACTGAAGAATCTGCGAAAGTTATCCCTTCATATGTGCAATACAAAGAATGCTTTTGAAAGCGGTTCTATCCAAATTTCAGATGCTATGCCAAATCTAGTAGAGTTGAGCATTGATTATTGCAAAGATTTGATTAAATTGCCTGATGGAATTTGTAACATTACCTCATTGAAGAAGCTCAGTATCACAAACTGCCACAAGCTTTCTGCATTGCCTCAAGATCTTGAAAAGTTGGAGAATTTGGAAGTGCTAAGGCTTTGTTCCTGCTCTGATTTAGTAGAGATGCCAAAATCTGTTGGAGGCCTTAGCAAGCTACGTTGTCTCGACATATCAGACTGTGTGAGTCTTCCACAATTACCAAACGATATTGGCGACTTGCAAAGGCTTGAAAAGTTTTACATGAAGGGTTGCTCAAAGTTGAGTGAATTGCCTTATTCGGTCATCAACTTTGAAAATGTAAAGCATAAAATATCTGTGATTTGTGATGATGAAGCCGCTGCACTGTGGGGACAATTTCCCAACATTCAAAACGTAAAGATAGAGATGCCTGAAGTAGATATTAACTTAAATTTTCTTCATGGAACACGTTCCCGAGTGTTGTTTCCTTAA 2640 0.3924 MVVSVEFICFRFIEYSKTFNSTITSKPQDHFHCCSHKSSIAMADLLSGGAVGAVMGEMVKYTLQKIKKGREFRPTLETNIETLKALAPLVEEMKGYNDLLDRPRGEIERLEKRIREGEELVKKCKKLTLWNFFSFPGYQGKLQKKDKELQRDLSVNVQLENKRDLIVLSAKVDGILDVLTRMMNSGQFEGNQIRGLCGAPEEPECLGMVEALNKLKIELMKDGVDVLVLTGLGGSGKSTLAKKLCWHPQIKGKFGGNIFFVTVSKNPNLKNIVQTLFEHCGCRVPEFQTDEEAINRLGLLMRQVGRIPILLVLDDVWPNSEGLVEKFKFQMKDYKILVTSRVAFRRFGSPCQLDPLDHGPAVSLFRHFAQLNHKSSYMPEKKLVREIVRGCKGSPLALQVIAGSLCKQPSEKWQNMKEFLQSQSILELNSTNLLCFLQQSLDILEDINQKECFMDMGLFPEDQRIPVTVLIDMWAELYNLDEDGTKAMAIVHDLITRNLINVIATRKVATETDKYYNNHYVMMHDLLRELAIHQSKGEPIEQRKRLIIDLNGDNRPDWWIGPNQQGLISRAYSFISGMFVKPIQLKVDARVLSISTDETFSSDWCDMQPDEAEVMVLNLRSDKYSLPDFTEKMWELKVLIITNYGFNYSELTKFELLGFLSNLKRIRLEKVSVPCLCKLKNLRKLSLHMCNTKNAFESGSIQISDAMPNLVELSIDYCKDLIKLPDGICNITSLKKLSITNCHKLSALPQDLEKLENLEVLRLCSCSDLVEMPKSVGGLSKLRCLDISDCVSLPQLPNDIGDLQRLEKFYMKGCSKLSELPYSVINFENVKHKISVICDDEAAALWGQFPNIQNVKIEMPEVDINLNFLHGTRSRVLFP 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03219 879 Gene3D - 437 534 IPR036388 -
Vivi2g03219 879 Gene3D Ribonuclease Inhibitor 596 839 IPR032675 -
Vivi2g03219 879 Gene3D - 199 346 IPR027417 -
Vivi2g03219 879 PRINTS Disease resistance protein signature 777 793 - -
Vivi2g03219 879 PRINTS Disease resistance protein signature 391 405 - -
Vivi2g03219 879 PRINTS Disease resistance protein signature 303 317 - -
Vivi2g03219 879 PRINTS Disease resistance protein signature 226 241 - -
Vivi2g03219 879 SUPERFAMILY RNI-like 625 831 - -
Vivi2g03219 879 Gene3D - 356 435 IPR042197 -
Vivi2g03219 879 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 42 869 IPR039203 GO:0050832
Vivi2g03219 879 Pfam NB-ARC domain 211 430 IPR002182 GO:0043531
Vivi2g03219 879 Coils Coil 107 127 - -
Vivi2g03219 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 455 IPR027417 -
Vivi2g03219 879 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 43 165 IPR008808 -
Vivi2g03219 879 ProSiteProfiles RPW8 domain profile. 40 191 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03219 Vivi-Chr2 133826940 133830630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03219 204 820 WRKY Transcription Factor Family AT5G45050 23.338 3.53e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03219 - - vvo:131652175 1738.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03219 2 133826940 133830630 Vivi1g02926 1 63817630 63821193 PCT