Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03202 ATGTCACTTTCGTTGTTCTCCACTCCTCAACAATCGCAACCACAGTCTCTTTTTCAACCACAGCAGCAACAGCAACAATCTCCCTTTCAGCAGCAGAGCAATTTGTTCCAGCCACAGCAACAACAACAGCAACAACAACAACAACAATTTCAACAACAGCAGCAGCAACAACAGTTGTTTCTGTTCACTAACGATAAAACTCCCGCCAGTTACAGCACCAATTGGGCGGATCTACATCCTGATTCCCAGAAGTTTCTACTTCAGATCGAGGAACGGGTATTGGAATATAGAGATGAAAGCCAGAGACTTGATCAGTGTAATCGTCTTTATGATTCTTCAGTTTCGAATGATGGGTTTGAGGTTGATGCAAGCCATATTGTTCAGGAACTTGGTGGAATCAGCACTGCTATGGAACGGCAGAAAACTTTGCTACATGAATTGATGTCAGCTGTTAAAGATATGTTACGTAATACAGAGGTTGCTGTTCGATCCTTTATGATCCTACGTCCAAGGTTCCATCATCCTAGTGGGGGAGCATCAAGTGCCACTGCCCCATCACAGACCCCAGGAGCAACAACACCTAGTTTGAACAGCCAATCAACAACTACATCTATAGTGCCCGTTTTTGATTTCTACAGTGGTCTTCCGAAGAAACCATCACCCTTTTTACAGCAAACAATTCTTCGATTTGAGAAATATCTTGGTGAATGTCATCAGTGGATTCAAGAGTTAGAGCAGCTGCTTCTCCTAGAATCTGAAAAAAACGGTTCTAATAATGGATCCTCGTTATTGCAGTCTCTTCCCAAAGTCATGACAAATGTGCATGACTTTTTTGTTCACGTGGCTGCAAAGGTTGAGAGCATTCATCAGTACATGGAATCTATGAAATCAGCATACCTAGCTGATCAGCGCCGCCGAGGGGAGGTGAATGATCCTTTTCTAGAGGCTGACCGGCGAGAAACTGCAAGACAAGAAGCTGTCAAAAGAGTTCATCCGACATTGCATTTACCTGCAAATTCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGAACTCAAGGAGCATTGACTGCCCAACAGACTGCTGCAACAACTTCAGCTTTATCAACAGGAAGTGGTTTGTCTCTTTTTAGCACACCAACTTCTGCTCCATCGTCGTCTATGTCATCTTTGTTTGCAACACCATCAACTCCGGCTCAAGGAAACTCATGGTTTGGATCATCTAGTGCTACGCCTCAAACCTCACTTTTCGGTTCTGCATCATCATCGCTACCTGGTGCGACATCATCTCCCTCTCTGTTCGGTAATAGTACTCCATTGTTTAGTTCAACTCCGGCTTCAAGTTCACTCTTTTCAACTCCGTTTGCGTCAGGTGCTGCAGCAGGATCAGGAGCAAGCTTTGGAGGATCTAAAAATCCACGGCCAAAATCCAGAACTGCTCGGCGCTAA 1458 0.4458 MSLSLFSTPQQSQPQSLFQPQQQQQQSPFQQQSNLFQPQQQQQQQQQQQFQQQQQQQQLFLFTNDKTPASYSTNWADLHPDSQKFLLQIEERVLEYRDESQRLDQCNRLYDSSVSNDGFEVDASHIVQELGGISTAMERQKTLLHELMSAVKDMLRNTEVAVRSFMILRPRFHHPSGGASSATAPSQTPGATTPSLNSQSTTTSIVPVFDFYSGLPKKPSPFLQQTILRFEKYLGECHQWIQELEQLLLLESEKNGSNNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYMESMKSAYLADQRRRGEVNDPFLEADRRETARQEAAXKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALTAQQTAATTSALSTGSGLSLFSTPTSAPSSSMSSLFATPSTPAQGNSWFGSSSATPQTSLFGSASSSLPGATSSPSLFGNSTPLFSSTPASSSLFSTPFASGAAAGSGASFGGSKNPRPKSRTARR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03202 486 Gene3D - 218 308 - -
Vivi2g03202 486 MobiDBLite consensus disorder prediction 337 352 - -
Vivi2g03202 486 MobiDBLite consensus disorder prediction 318 352 - -
Vivi2g03202 486 MobiDBLite consensus disorder prediction 389 414 - -
Vivi2g03202 486 MobiDBLite consensus disorder prediction 1 48 - -
Vivi2g03202 486 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 6 474 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Vivi2g03202 486 MobiDBLite consensus disorder prediction 431 486 - -
Vivi2g03202 486 MobiDBLite consensus disorder prediction 179 199 - -
Vivi2g03202 486 MobiDBLite consensus disorder prediction 431 460 - -
Vivi2g03202 486 MobiDBLite consensus disorder prediction 176 199 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03202 59 486 NAC Transcription Factor Family AT4G37130 63.014 5.28e-180 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03202 K14307 - gmx:100776992 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03202 2 133316301 133322496 Vivi2g03202 2 133316301 133322496 ECH