Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03200 ATGACTGTAACACGTATAAATTTAGAAAGCCTGTTTTTACATCCACTCATTTCTCAAAAACCACGTTCCTCAAAATTTACCAATCCGTACAGTGCAACTTTGACACAGTTCACTTCCTTATTTATACCAAAACCCTATAGCTTAATTTCGCAAGAAACAAAAATCGCAATGGCCATGGATGAGTTCATGTCCAACACTCTCATTTCAACCATTATTACTCTCCTAATTGGAGCTTTAATCTATCACATAAAGAAACCACATACAAAGAACTGCACTGCACCTCAAGCTGATGGTGCATGGCCTATTATAGGTCATTTGCATCTCTTTGGAGCTAAGAAACTTACACACAAAACACTTGGTACCATGGCTGACAAGCATGGACCGATTTTCACAATCAAACTTGGTTCATACAATGTTCTTGTACTAAGTAGCAGTGAAATGGCCAAAGAATGTTTCACTCTCCACGACAAAACATTCTCCACTAGGCCCTTTGTTGCAGCCTCGAAGCTCATGGGATACAACTATGCTATGTTTGGTTTCACTCCTTATGGTCCTTACTGGCGTGAGATGAGGAAGTTGGCTACGCTCGAGCTTCTCTCGAACCAGCGACTCGAGCTTTTGAAGAACACGAGAGTGTCTGTGATAGATGCTGCAGTGGGAGAGCTATATAGGTTATGGAAAATAAAGGGTTGTCAAAAAGAAGGAGTTTTGGTTGATATGAAGGAGTGGTTTGGTGATTTGACGCATAATATAGCTTTGAAAATGGTGGGAGGGAAGGTATATTATGGTGAAGGTGGGAAGTATAGGGAAGCGATGAGAGATTGGGTGTGTTTGTTTGGTGTGTTTGTGTTGTCTGATGCAATTCCGTTTTTGGGGTGGTTAGATGTTAATGGTTATGAGAAGGCTATGAAGAGAACTGCGAGGAAATTGGATAGTTTGGCTGAAGGGTGGTTGGAGGAACACAAAAGGAAAAGAGGTTTGGGTGAGAGTGGAAAGGAGGAACATGATTTCATGGATGTTATGTTGAATGTTTTGCAGGGTTCAGAGGTTTGTGGTTATGATTCAGATACAATCATCAAGGCTACTTGTCTGAATCTAATTTTAGCAGGAAGTGACACCACCATGGTGACTCTAACATGGGCACTATCCCTACTACTCAATCATCAAATGGAACTCAAAAAGGCACAGGATGAGTTGAACACTCATATTGGGAAGGACAGGAAGGTGGAAGAATCTGACATAAAGAACTTATCATACCTTCAAGCCATTGTCAAGGAAACATTACGACTCTATCCACCAAGTCCAATTATCACCTTGCATGAAGCAATGAACGACTGCACTTTTTCATGTGGCTATCACATTCCTGCTGGTACACAGTTGATGGTGAATGCTTGGAAGATCCACCGAGACAGTCGTGTTTGGACCGATCCTCATGATTTCAAGCCTGAGAGGTTTTTGACAAGCCATAAAGATGTTGACATCAGAAGTCAGAACCATGAGCTTGTAACCTTTGGTTCTGGAAGGAGAGCATGTCCAGGGTCCTCATTGGCTTTAAGAGTGGTACATTTGACATTGGCTAGACTGCTACACTCATTCAATGTTGCTTCTCCCTTGAATCAAGCTGTAGACATGACAGAAAGCCCTGGACTCACAAATTTAAAAGCAACCCCACTTGAAGTTATTCTAACACCGTGTCTAGATACCAACCTTTATGAAGACTAG 1722 0.417 MTVTRINLESLFLHPLISQKPRSSKFTNPYSATLTQFTSLFIPKPYSLISQETKIAMAMDEFMSNTLISTIITLLIGALIYHIKKPHTKNCTAPQADGAWPIIGHLHLFGAKKLTHKTLGTMADKHGPIFTIKLGSYNVLVLSSSEMAKECFTLHDKTFSTRPFVAASKLMGYNYAMFGFTPYGPYWREMRKLATLELLSNQRLELLKNTRVSVIDAAVGELYRLWKIKGCQKEGVLVDMKEWFGDLTHNIALKMVGGKVYYGEGGKYREAMRDWVCLFGVFVLSDAIPFLGWLDVNGYEKAMKRTARKLDSLAEGWLEEHKRKRGLGESGKEEHDFMDVMLNVLQGSEVCGYDSDTIIKATCLNLILAGSDTTMVTLTWALSLLLNHQMELKKAQDELNTHIGKDRKVEESDIKNLSYLQAIVKETLRLYPPSPIITLHEAMNDCTFSCGYHIPAGTQLMVNAWKIHRDSRVWTDPHDFKPERFLTSHKDVDIRSQNHELVTFGSGRRACPGSSLALRVVHLTLARLLHSFNVASPLNQAVDMTESPGLTNLKATPLEVILTPCLDTNLYED 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03200 573 FunFam Cytochrome P450 82C4 83 563 - -
Vivi2g03200 573 Gene3D Cytochrome P450 83 562 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03200 573 PRINTS P450 superfamily signature 511 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03200 573 PRINTS P450 superfamily signature 369 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03200 573 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03200 573 PRINTS P450 superfamily signature 502 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03200 573 PRINTS E-class P450 group I signature 378 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03200 573 PRINTS E-class P450 group I signature 358 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03200 573 PRINTS E-class P450 group I signature 147 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03200 573 PRINTS E-class P450 group I signature 463 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03200 573 PRINTS E-class P450 group I signature 123 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03200 573 PRINTS E-class P450 group I signature 501 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03200 573 PRINTS E-class P450 group I signature 421 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03200 573 PRINTS E-class P450 group I signature 511 534 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03200 573 PANTHER CYTOCHROME P450 82C3-RELATED 74 571 - -
Vivi2g03200 573 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 504 513 IPR017972 GO:0005506|GO:0016705
Vivi2g03200 573 SUPERFAMILY Cytochrome P450 99 564 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03200 573 Pfam Cytochrome P450 97 552 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g03200 573 CDD CYP82 127 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03200 Vivi-Chr2 133254702 133261001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03200 63 571 Cytochrome P450 AT4G31940 50.286 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03200 - - vvo:131650056 1139.79