Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03173 ATGGCCAATTGCAAAAGGAAGGAGCAAACACTTGGAAAGGAGCTGGAGAACCCACAAAGGCCAGAGAAAGGAGTCTACATTCCCACGGGAAGAAAGTTCACTCTTGGGGAAAGTTCTAAAGAAAATCCAGGGCATCATTTGGAAAACAATATTGAAGCTAAGGGTCCAATCCTTACTCCTTTGGTTGATATTAGTGCAGAGGTTCCAAATGTGGAACAAACTGATAAGAATGATGACTCAATCATAGTTCCTATCCAGCCGACCCCTATTCAAGAGATGTCTAATGGAAATGATGGCTCATCTGAAGAAGAATATGTTGATGCTACACAAATGTGCATATACTGGAACATCAGAGGGATTGCTAATGGTTCCTCTAGGCTGGCTTTGAAAAGGCTAATTCAGAATAACTCACCAGACTTGGTCTTCATTGCTGAGCCTTGTATGGACTATGGCAACTTTCCTCACAAATGGTTACACAGGTCGAAGGATTGGAATAAGAACATTTTTGGTGATGTGAAACTTAAGGTGGTGGAGACTGAAAAAGCCCTTAAGGATATTCAACAGAAAATCAGCTTATGTGGTTACAATGAAAGTCTGCAAATGGTTGAAGTTAAGGCTCAATACCAGCAGGTTATTGAATCTCATCTTGTTGATCATTTCTCTAACCTTTTTAATCAAGGTGTATCTATGCAGGATTCAGGGCTCATTGAGAAGTTCATTCCAAACCTGGTGAATGAAGGCACAAATGCAATGCTGGCTGCAGTCCCTAGTGTGGAGGAAATAACTCATGTTGTCATGAACTTAAAAGCTGACTCAGCGCCTGGCCCTAATGGGTTTGGTGCTATATTCTTCCAAAAATACCGGGGCATCATCAAGAATGATGTTGTTTTGGCTGTGCTTCAATTTTTTCTGCAAGACTGGATTCTTCCTAACTATAACACTAACACTATAATGCTCATACCTAAAAACAATGAGCCTAATCTCATTAATCACTATAGGCCCATAGCTCTTGCCAACTTTAAATTCAAAACTATATCCAAGATTATTGCTGACAGATTAGCCTCTATTTTACCTTCTTTGATCTCTCTTGAGCAAAAAGGTTTTATCATGGGTAGAAATATAAAGGATGGTATTTGTCTCACCTCTGAGGCAATTACTATTCTTGGCAATAAGAGTTATAGTGGTAATGTAGCTCTGAAAATTGACATTTTAAAAGCCTTTGATACCCTTAATTGGAAATTTCTCCTCAAGACTCTTACTTGTTTTGGTTTTAGTAGTAAATTTTGTAATTGGATTGCTACTATTTTAAATTATGCTAAGCTTTCTATTGGTATCAATGGCAAGCAGGCTGGCTTCTTTAATTGCTCCAATGGAGTGAGACAAGGAGATCCCTTGTCTCCTCTTATTTTTTGTTTAGCTGAAGAGGTCCTAAGGGTGATAAAAAAATCCATCAAGTCAATTGCTAATTTACTAATGGAGTATGCTGCCATATCTGGCAAAGTTTGCAATAACACTAAATCCTTGGTCTATGCTGGTGGAATGACTGTAGAAAGACACAAATGCTTGGCTGATATTCTTGGATTTCAAATGGCCAAACTTCCTTTCTTATATCTTGGTGCTCCCATCTTTGTTGGCAGGCCTAAAACTCATTATTTTTCTTTTATTGCAGATAAGATTAAAGCAAAGCTGGCACATTGGAAGGCTTGTTTGCTATCTATGGCTGGAAGATTACAACTCATCAAGGCAGTCATCCATAGCATGTTGTTGCACTATATAACAATATACAACTGGCCTGCTTCCCTCAACAAGAAGATCAGCACCATAAAAAAGATAATGGATTGCTTTGAGCTTATGTTGGTTCCTAGATCCCCACAGGCTATGGCAGTTGTCCTCTCCATTGTTTGCAGCTTCTTCTACCAAGTTTGGAGAGCCAGAAATTCGAACAGATTTGATGGCAAAATAATACATTGGAAGTCTTGTATCACTCATATTATGGCTCGAGCCAAGAGGGTTAAAGCTAATATTGACGGTGTTGCTCGAGGTGATCCAGTCCTTATGGCTTGTGGTGTAATTTTCCGTAATAATAACGCTACTCATTTGGGAAGTTTTTGTGACTATATGGGAGAAGGGAACTCTGAATTGGCTGAGCTTTGGGCAGCTATGCTTGCTGTTCAAAAAGCAGTTAACATGGGATGGAGGAAGCTTTGGATCGAAACGGATTGTATGCTTGTGGTGAAAGCTTTCTCTGATCCGACTCTTGTTCCTTGGAGAACCAGATCTCGTTGGCTCAGTTGTCATGCTTACTCTCAAAGTAAGGTTCTCTACTACATTTTTCTCACAATCCCATCTGATCAATACATGCAAACAAAGCTATCTAACATGGAAAAATTAATGAAACCCCTTGTAGTAATTCTTTTTTTGTTTTTGAGTGTGCACGATGTGTCTTTGGCAAGAACAAAGAAGAGTGAGAATAAGATGAATTACATTGTTCATGTTTCCAAATCCACAATTCCAACAAGCTTCAACCACCCTTCAATCTGGTACAAATCAATTCTGAAGTCGGTATCCCAGTCAGCAGAAGTACTATATAGCTATGATAAGGCAATAAATGGATTCTCGACAAGTTTGAGTGATGAAGAACTTGAGTTACTAAAAAGGCAATATGGGATTCTAAAGGTGACACCAGATAAAAAGTACAAACTTCACACAACCCGAACACCGAAGTTTCTTGGGCTTGATAAAATTGCTAATTTGTTCCCCACGACAAACAAAAGTAATGATGTAATTGTGGGAGTAATAGACTCAGGTGTATGGCCTGAAAGCAAAAGTTTTGATGATACTGGATTCGGGCCTATCCCGCCCAAATGGAAAGGAAAATGTGAAACAGGTACCAATTTTACAACATCTAATTGTAATAAGAAATTGATTGGTGCTAGGTTTTTTGCAAAGGGTTTTGAGGCAAGTTGGGGTCCAATTAATGAAACCATTTTGTATAGATCACCTCGAGATGATCTAGGCCATGGAACTCACACTGCGAGCACAGCTATAGGATCTACGGTGGAAAACACAAGTTTTTTTGGCTATGCCAAAGGGACTGCAAGTGGGATGGCAATTGGTGCTAGAGTTGCTGTCTATAAGGTTTGTTGGAAAACTTCCTGCATGGATTCTGATATATTGGCAGGAATAGATCAAGCCATTGCTGACAACGTCAATATTCTTTCTTTGTCACTTGGAGGTTCAAAAAATGATTACTTTAAGGATGGCATCGCAATTGGAGCATTTGCAGCAATGGAACATGGCATTCTAGTCTCATGTTCAGCAGGAAATTCTGGCCCTACTCCTTTCAAGGTAGATAATGTAGCACCATGGATTACCACTGTGGGAGCTGGAACACTCGATCGAGATTTCCCTGCATACGTCCGTTTGGGAAATGGAAAAAATTATTCAGGTGTGTCCCTTTATAAAGGTAACGGTTTGCCCGATACTCTTGTGCCAATCATATATGCAGGGAACGCAAGTAAGGGTGAAGTAAGAAGTGCTGAGTTATGTTACTCACATAGCTTGGCTCCGGAAAAAGTAGCAGGAAAGATTGTGTTGTGTGATCGTGGAGATCTCGCTCCGATATTCCAAGGAGGTACTGTAAAATCTGCGGGTGGTTTGGGCATGGTCTTAGCCAACAGTAAGAGAGATGGAGAATCACCACTAGCATATGCCCATATTTTTCCAGCAACTTCAGTTAGCTTCACATATGGCAAAGCTATAAAAAATTACTTGTTTTCTGATCAAAACTCGACAGCTACAATTGTGTTTCGGGGAACAAAGCTAAAGGTTAAGCCATCTCCTATGGTTGCAGATTTCAGCTCACGAGGCCCCAATTCGATAACCCCTCAGATATTGAAACCTGATATTATTGCTCCTGGTGTTAACATTATAGCAGCTTATTCAAAAAGTGTGAGTCCTACATTTTGGGCTTTCGATCCTAGGCGTGTAGATTTCAATATTTTATCAGGAACATCCATGGCATGTCCACACGTAAGTGGACTAGCAGCTCTAATTAAGTCCATTCATCCAGATTGGAGCCCAGCCGTCATTCGATCCGCGTTGATGACAACCGCTTATACAACTTACAAAAACAATCAAACATTATTAGACAGTGCAACAAACAAGCCTTCAACTCCATTTGAGTTTGGTGCTGGACATGTTAACCCTATTTCCGCCCTAAATCCCGGACTCGTCTATGATTTAACAACAGATGACTACTTGAGCTTCCTCTGTGCATTGAACTACTCATCTGTTAATATTGAAATTGTAGCAAGGAGAAAGTACACATGCGATCCGAAGAAACAATACAGTGTAACAAACCTTAATTACCCTTCCTTTGCTGTGGTGTTTAAGAGTGAGCATGATAAGATTAAACACACTCGGACTCTTACTAATGTGGGTGCAGCAAGAACTTACAAGGTATCAGTTAAGTCAAATGTTGCATCTATCAAGATCTTAGTTGAACCAAAAGTGTTAAGTTTTAAGAAAAATGAGAAAAAATCATACGTAGTTACATTTACTACATCAACTTTGAAACAAAATATTACTCATAGTTTTGGAAGCTTGGAATGGTTTGATGGAAAAACTCTTGTTAGAAGTCCTATAGCGTTTAGTTGGAAATTACATTGA 4671 0.395 MANCKRKEQTLGKELENPQRPEKGVYIPTGRKFTLGESSKENPGHHLENNIEAKGPILTPLVDISAEVPNVEQTDKNDDSIIVPIQPTPIQEMSNGNDGSSEEEYVDATQMCIYWNIRGIANGSSRLALKRLIQNNSPDLVFIAEPCMDYGNFPHKWLHRSKDWNKNIFGDVKLKVVETEKALKDIQQKISLCGYNESLQMVEVKAQYQQVIESHLVDHFSNLFNQGVSMQDSGLIEKFIPNLVNEGTNAMLAAVPSVEEITHVVMNLKADSAPGPNGFGAIFFQKYRGIIKNDVVLAVLQFFLQDWILPNYNTNTIMLIPKNNEPNLINHYRPIALANFKFKTISKIIADRLASILPSLISLEQKGFIMGRNIKDGICLTSEAITILGNKSYSGNVALKIDILKAFDTLNWKFLLKTLTCFGFSSKFCNWIATILNYAKLSIGINGKQAGFFNCSNGVRQGDPLSPLIFCLAEEVLRVIKKSIKSIANLLMEYAAISGKVCNNTKSLVYAGGMTVERHKCLADILGFQMAKLPFLYLGAPIFVGRPKTHYFSFIADKIKAKLAHWKACLLSMAGRLQLIKAVIHSMLLHYITIYNWPASLNKKISTIKKIMDCFELMLVPRSPQAMAVVLSIVCSFFYQVWRARNSNRFDGKIIHWKSCITHIMARAKRVKANIDGVARGDPVLMACGVIFRNNNATHLGSFCDYMGEGNSELAELWAAMLAVQKAVNMGWRKLWIETDCMLVVKAFSDPTLVPWRTRSRWLSCHAYSQSKVLYYIFLTIPSDQYMQTKLSNMEKLMKPLVVILFLFLSVHDVSLARTKKSENKMNYIVHVSKSTIPTSFNHPSIWYKSILKSVSQSAEVLYSYDKAINGFSTSLSDEELELLKRQYGILKVTPDKKYKLHTTRTPKFLGLDKIANLFPTTNKSNDVIVGVIDSGVWPESKSFDDTGFGPIPPKWKGKCETGTNFTTSNCNKKLIGARFFAKGFEASWGPINETILYRSPRDDLGHGTHTASTAIGSTVENTSFFGYAKGTASGMAIGARVAVYKVCWKTSCMDSDILAGIDQAIADNVNILSLSLGGSKNDYFKDGIAIGAFAAMEHGILVSCSAGNSGPTPFKVDNVAPWITTVGAGTLDRDFPAYVRLGNGKNYSGVSLYKGNGLPDTLVPIIYAGNASKGEVRSAELCYSHSLAPEKVAGKIVLCDRGDLAPIFQGGTVKSAGGLGMVLANSKRDGESPLAYAHIFPATSVSFTYGKAIKNYLFSDQNSTATIVFRGTKLKVKPSPMVADFSSRGPNSITPQILKPDIIAPGVNIIAAYSKSVSPTFWAFDPRRVDFNILSGTSMACPHVSGLAALIKSIHPDWSPAVIRSALMTTAYTTYKNNQTLLDSATNKPSTPFEFGAGHVNPISALNPGLVYDLTTDDYLSFLCALNYSSVNIEIVARRKYTCDPKKQYSVTNLNYPSFAVVFKSEHDKIKHTRTLTNVGAARTYKVSVKSNVASIKILVEPKVLSFKKNEKKSYVVTFTTSTLKQNITHSFGSLEWFDGKTLVRSPIAFSWKLH 1556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03173 1556 Gene3D - 669 801 IPR036397 GO:0003676
Vivi2g03173 1556 MobiDBLite consensus disorder prediction 1 20 - -
Vivi2g03173 1556 ProSiteProfiles Reverse transcriptase (RT) catalytic domain profile. 301 542 IPR000477 -
Vivi2g03173 1556 ProSiteProfiles Serine proteases, subtilase domain profile. 909 1407 - -
Vivi2g03173 1556 Gene3D Peptidase S8/S53 domain 927 1420 IPR036852 GO:0004252|GO:0006508
Vivi2g03173 1556 FunFam Subtilisin-like protease SBT1.5 927 1149 - -
Vivi2g03173 1556 SUPERFAMILY Ribonuclease H-like 671 764 IPR012337 -
Vivi2g03173 1556 Gene3D - 1133 1276 - -
Vivi2g03173 1556 Pfam Reverse transcriptase-like 674 750 IPR002156 GO:0003676|GO:0004523
Vivi2g03173 1556 CDD PA_subtilisin_like 1139 1268 - -
Vivi2g03173 1556 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 828 1550 IPR045051 -
Vivi2g03173 1556 SUPERFAMILY DNA/RNA polymerases 254 473 IPR043502 -
Vivi2g03173 1556 CDD RT_nLTR_like 314 542 - -
Vivi2g03173 1556 CDD RNase_H_like 674 757 IPR044730 -
Vivi2g03173 1556 ProSitePatterns Serine proteases, subtilase family, serine active site. 1337 1347 IPR023828 -
Vivi2g03173 1556 FunFam Subtilisin-like protease SBT1.9 817 902 - -
Vivi2g03173 1556 Pfam PA domain 1180 1254 IPR003137 -
Vivi2g03173 1556 CDD Peptidases_S8_3 899 1373 IPR034197 -
Vivi2g03173 1556 Pfam Subtilase family 926 1399 IPR000209 GO:0006508|GO:0008236
Vivi2g03173 1556 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 320 482 IPR000477 -
Vivi2g03173 1556 Pfam Fibronectin type-III domain 1454 1550 IPR041469 -
Vivi2g03173 1556 Pfam Peptidase inhibitor I9 828 902 IPR010259 -
Vivi2g03173 1556 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 811 902 IPR037045 -
Vivi2g03173 1556 PRINTS Subtilisin serine protease family (S8) signature 1336 1352 IPR015500 -
Vivi2g03173 1556 PRINTS Subtilisin serine protease family (S8) signature 1003 1016 IPR015500 -
Vivi2g03173 1556 PRINTS Subtilisin serine protease family (S8) signature 925 944 IPR015500 -
Vivi2g03173 1556 MobiDBLite consensus disorder prediction 1 50 - -
Vivi2g03173 1556 Gene3D - 1424 1553 - -
Vivi2g03173 1556 FunFam subtilisin-like protease SBT1.5 1133 1275 - -
Vivi2g03173 1556 SUPERFAMILY Subtilisin-like 901 1411 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03173 Vivi-Chr2 132509202 132519610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03173 819 1553 Subtilisin-like Serine Gene Family AT5G67360 62.822 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03173 - - vvo:131650051 3131.66