Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03172 ATGATCATCCAAATTGAAAGGTTATTCAGATTTATGAGTTTTACATCATCTGTTGTTGGATTGCTTTGTTACGCTCTCAGCTCTTCTTTCAACCATCTATTTGGAGATTGGAACTCATGGAAGATTATTCTATACACTCTTTTCAGTTTCATCATCAGCCTCCTCATTTTGTTTGCCAAGATTTGGCAGTCATCGAGAAGTCTCCGATTCAAAGCTCACACCGCATTTTTGGTACTGACAATTACCTCCGTGTATTCCTTTTTCTTTGATAAAGAGATGAATGAAAAACCAGATTCATTTAGCTTGATTTCATGTGCTGCTTTTGCTATCATGTCAATGAGCTTGTCGAGGCAATCTCAGTGCGGATTTGAAGTGGATCTTCTTTATTTTTTCCTTGGATCCCTAATTGTGTTACTCATGAAGATTAAATTGCAGTTATTCTTTGTTGGAGCAGGTTTCAGCTATTCTCTTATTATTATTCGATCTTCTTTCACTTCCTTCAACACCACAGCAGAAAATGAGTATTTAGAGCTTAGAGGTGAAAATTCAGTAGTCATTGAAATGACTTCACTATCACTATCTAGTATGATGCAACAATTTATGACTTGTACTAATGCGCTTCAAAATGAAAGTACAAGTCTCATCGAGAGGCTTATGGAGAAATACAATACAGATACAGATACAGATACGCGTGATTTTGTAATGGATACTCTGTCGTCAAGAAAGATAGATAATCTTCATGAATCTGCGAAATTGATGTTAGCATCTGGTTACGAGAAAGAATGTTCTGATGCATATAGCTGTTGGCGAAGGGTATTCTTGCAGGAGTGTCTCATAAACAAAATATTTGGGTTGCCAATGCCAACTACAAACATCAATAATAAGATGGATAAGAATGAGAGGGAGCAATATTCAGATACCATGTTTGAAAGATGGATGACTGCTTCGGATGTAGCTATGACAATCTTGTTTCCCTTTGAACAACAGCTCTGCAATCGTGTCTTCTCGGGGTTTTCCTCCGCGGCTTCTACCTGTTTCTTTGAGGTTTGCAAAGAAGCAACATCTCACCTGCTGTGTTTCGCAGATGTGCTTGCTTCTGGGAGCCCTACAAAATGGCGTTTGTTCAAAATGCTACAAATATTTGAGCATTTGGGTAATCTAATTTCGAAATTCCAATCACTTTTTCCAGATTCGATGTTACTGAACGAAGCAGTTGCAGTGAGGAATAGATTAGGAGAAGCTAGCAGGGATCTTTTCATGGAAATGCATAATGTTATTTTTAGAGTCCCAACAGCAAAGAACACTGTTAAGTTTCATGGCGATATTCATCCGGTTACTTCTGAGGTTATTAGCTATGTGTCGCTTGCATGCTTGTCGCGGCAGAAGTTGGAAAATATTTTACAGACATACTCCAAGGATGGTAATGAGATGGAAGCATCTTCATTTTTCTTGAAGCAGATGGAGCAGATAATGGAGATGTTACCTAAGAAATTGATAGCCAAGTTGAAAAACTGCAAAGACCCTGCTTTGCGCCATATTTTCATGGTAAATAATAGGAGCCACATAGAAGCTATAAATCAATTCTATGAATTGGAAACTATTTTTGGCAATGATTGGTTCCAAAATAACAAAGCTAAAATTCGACAAAACGTTGAGCTTTATAAAAGATGTTCATGGAATATGGTGTTGGACTTTCTGAAGGTGGACAACAATGACAACATTACAGAAGAATTGTTGAAAGAGAAGATGCTTTTGTTCAATACTCACTTTGAAGAGATATGCAGAGTTCAGTCAGATTGGTTTGTTTATGACAATAATCTAAGGGAAGAAATAATATCATATGTGGAAAATGTCTTGCTTCCAGCATATGGAATTTTCATTGGGAGGCTTCAGGATATTCTTGGTAACCAAGCTTATGATTACATTACATATGGAATGTTAGAGATTCAAGATAGACTCAGTCAGATGTTCATGTTGTACAGTAGTAGTAATTTGTAA 1998 0.3699 MIIQIERLFRFMSFTSSVVGLLCYALSSSFNHLFGDWNSWKIILYTLFSFIISLLILFAKIWQSSRSLRFKAHTAFLVLTITSVYSFFFDKEMNEKPDSFSLISCAAFAIMSMSLSRQSQCGFEVDLLYFFLGSLIVLLMKIKLQLFFVGAGFSYSLIIIRSSFTSFNTTAENEYLELRGENSVVIEMTSLSLSSMMQQFMTCTNALQNESTSLIERLMEKYNTDTDTDTRDFVMDTLSSRKIDNLHESAKLMLASGYEKECSDAYSCWRRVFLQECLINKIFGLPMPTTNINNKMDKNEREQYSDTMFERWMTASDVAMTILFPFEQQLCNRVFSGFSSAASTCFFEVCKEATSHLLCFADVLASGSPTKWRLFKMLQIFEHLGNLISKFQSLFPDSMLLNEAVAVRNRLGEASRDLFMEMHNVIFRVPTAKNTVKFHGDIHPVTSEVISYVSLACLSRQKLENILQTYSKDGNEMEASSFFLKQMEQIMEMLPKKLIAKLKNCKDPALRHIFMVNNRSHIEAINQFYELETIFGNDWFQNNKAKIRQNVELYKRCSWNMVLDFLKVDNNDNITEELLKEKMLLFNTHFEEICRVQSDWFVYDNNLREEIISYVENVLLPAYGIFIGRLQDILGNQAYDYITYGMLEIQDRLSQMFMLYSSSNL 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03172 665 PANTHER EXOCYST COMPLEX PROTEIN EXO70 199 657 IPR004140 GO:0000145|GO:0006887
Vivi2g03172 665 SUPERFAMILY Cullin repeat-like 197 657 IPR016159 -
Vivi2g03172 665 Gene3D Exocyst complex component Exo70 167 663 - -
Vivi2g03172 665 Pfam Exo70 exocyst complex subunit 310 654 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03172 Vivi-Chr2 132335577 132337665 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03172 232 657 EXO70 exocyst subunit family AT5G58430 42.627 1.35e-98 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03172 - - mtr:25490887 606.675