Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03160 ATGGCTATCTTCTTTCTTCCTTCTAGTTCTCATGCTTTTTTTCTTACACTCATGTTGTTTTTCGTCACTAATATTTCAGCTCAACCACTACAACTCAGTGGAACAAACTTTTCATGCCCGGTGGATTCACCTCCTTCATGTGAAACTTATGTGACATACTTTGCTCGGTCTCCAAACTTTTTGAGCCTAACAAACATATCAGATATATTTGATATGAGTCCTTTATCCATTGCAAAAGCCAGTAACATAGAAGATGAGGACAAGAAGCTGGTTGAAGGCCAAGTCTTACTAGTACCTGTAACTTGTGGTTGCACTAGAAATCGCTATTTTGCGAATTTCACTTACACAATCAAGCTAGGTGACAACTATTTCATAGTTTCAACTACTTCATACCAGAATCTTACAAATTATGTGGAGTTCGAAAATTTCAACCCTAATCTAAGTCCAAATCTATTGCCACCAGAAATCAAAATTGTAGTCCCTTTATTCTGCAAATGCCCTTCAAAGAATCAGTTGAACAAAGGAATAAAGTATCTGATTACTTATGTGTGGCAGTCTAATGATAATGTTACCCTTGTAAGTTCCAAGTTTGGTGCATCACAGGTGGACATGTTTACTGAAAACAGTCAAAACTTCACTGCTTCAACCAACGTTCCGATTTTGATCCCCGTGACAAAGTTACCGGTAATTGATCAACCGTCTTCAAATGGAAGAAAAAACAGCACTCGAAAACCTGCTTTTATAATTGGTGTTAGCCTAGGAAGTGCTTTTTTCATTATAGTTTTAACACTATCACTTGTTTATGTATATTGTCTGAAAATGAAGAGATTGAATAGGAGTACTTCATTGGCGGAGACTGCAGATAAGTTACTTTCAGGTGTTTCGGGTTACGTAAGCAAGCCAACAATGTATGAAATGGATGCGATCATGGAAGGTACAACGAACCTGAGTGAGAATTGTAAGATTGGTGAATCAGTTTACAAGGCTAATATAGATGGTAGGGTTTTAGCAGTGAAAAAAATCAAGAAAGATGCTTCCGAGGAGCTGAAAATTCTGCAGAAGGTAAATCATGGAAATCTTGTGAAACTTATGGGTGTGTCTTCCGACAACGACGGAAACTGTTTCCTTGTTTATGAGTATGCTGAAAATGGATCACTTGATGAGTGGTTGTTTTCGGAGTCGTCGAAAACCTCGAACTCGGTGGTCTCGCTTACATGGTCTCAGAGAATAACAGTAGCAGTGGATGTCGCAGTTGGTCTGCAATACATGCATGAACATACTTACCCAAGAATAATCCACAGAGACATCACAACAAGTAATATCCTTCTTGATTCAAATTTTAAGGCCAAGATTGCAAATTTTTCCATGGCTAGAACTTCAACCAACTCGATGATGCCAAAAATTGATGTTTTCGCTTTTGGGGTGGTTCTGATTGAGTTGCTTACCGGCAAGAAAGCGGTAACAACAAAAGAAAATGGTGAGGTGGTTATTCTGTGGAAGGATTTCTGGAAGATTTTTGATCTAGAAGGGAATAGAGAAGAGAGCTTGAGAAAATGGATGGATCCTAAGCTAGAGAATTTTTATCCTATTGATAATGCTCTTAGTTTGGCTTCTTTGGCAGTGAATTGTACTGCAGATAAATCATTGTCAAGACCAAGCATTGCAGAAATTGTTCTCTGTCTTTCTCTTCTCAATCAATCATCATCTGAACCAATGTTAGAAAGATCCTTGACATCTGGTTTAGATGCTGAAGCTACTCATGTTGTTACTTCTATAGTAGCTCGTTGA 1788 0.3814 MAIFFLPSSSHAFFLTLMLFFVTNISAQPLQLSGTNFSCPVDSPPSCETYVTYFARSPNFLSLTNISDIFDMSPLSIAKASNIEDEDKKLVEGQVLLVPVTCGCTRNRYFANFTYTIKLGDNYFIVSTTSYQNLTNYVEFENFNPNLSPNLLPPEIKIVVPLFCKCPSKNQLNKGIKYLITYVWQSNDNVTLVSSKFGASQVDMFTENSQNFTASTNVPILIPVTKLPVIDQPSSNGRKNSTRKPAFIIGVSLGSAFFIIVLTLSLVYVYCLKMKRLNRSTSLAETADKLLSGVSGYVSKPTMYEMDAIMEGTTNLSENCKIGESVYKANIDGRVLAVKKIKKDASEELKILQKVNHGNLVKLMGVSSDNDGNCFLVYEYAENGSLDEWLFSESSKTSNSVVSLTWSQRITVAVDVAVGLQYMHEHTYPRIIHRDITTSNILLDSNFKAKIANFSMARTSTNSMMPKIDVFAFGVVLIELLTGKKAVTTKENGEVVILWKDFWKIFDLEGNREESLRKWMDPKLENFYPIDNALSLASLAVNCTADKSLSRPSIAEIVLCLSLLNQSSSEPMLERSLTSGLDAEATHVVTSIVAR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03160 595 Pfam Protein tyrosine and serine/threonine kinase 342 462 IPR001245 GO:0004672|GO:0006468
Vivi2g03160 595 ProSitePatterns Tyrosine protein kinases specific active-site signature. 431 443 IPR008266 GO:0004672|GO:0006468
Vivi2g03160 595 ProSiteProfiles Protein kinase domain profile. 284 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03160 595 Gene3D Transferase(Phosphotransferase) domain 1 464 577 - -
Vivi2g03160 595 SUPERFAMILY Protein kinase-like (PK-like) 301 562 IPR011009 -
Vivi2g03160 595 FunFam serine/threonine receptor-like kinase NFP 463 578 - -
Vivi2g03160 595 Gene3D Phosphorylase Kinase; domain 1 291 380 - -
Vivi2g03160 595 Gene3D Transferase(Phosphotransferase) domain 1 381 463 - -
Vivi2g03160 595 ProSiteProfiles LysM domain profile. 113 160 IPR018392 -
Vivi2g03160 595 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 13 569 - -
Vivi2g03160 595 FunFam Serine/threonine receptor-like kinase NFP 275 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03160 Vivi-Chr2 132212008 132214816 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03160 46 562 Receptor kinase-like Gene Family AT2G23770 29.483 1.15e-69 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi2g03160 PK_Tyr_Ser-Thr 5.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03160 - - cam:101515074 904.434