Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03158 ATGCATCTCTTTCCCTTCCCTCCTATCTTCATTTTCCCTCTCTTATTCTTCTTCTACTTCACCAACATCTCCATCATCCTAGGACAACAACCTTACATTGGCCTATCCACAACAGCCTGTCCTCGAAAAGGCGACTCCAAATCAATCCGCGGCTACACATGTAACGGCCAAACCACATGCCAAGCATACCTCACCTTCAGATCCCAACCAATTTACAGTTCAGTTTCAACAATATCATCCCTACTAGGCTCAAACCCTTCTCATCTCGCCGAAATCAACTCGGTTTCCTTAAACGAAACCTTCGAAACAAACAAGATGGTAATCGTTCCTGTCAACTGTTCTTGTTCTGGTAACTACTACCAAGCAAACACTTCCTATGTTTTTCAAAACACAGACACTTATTTCCTAGTTGCTAACAACACTTTCGAAGGCCTTTCGACTTGTCAAGCTTTGATGCATGAGAATCATAACCCTGCTGATATATATCCTGGTAGAAAATTGCTTGTTCCTCTTAGATGTGCTTGTCCTACAAAGAATCAAACTGAAAACAACATTAAGTATCTCTTAAGCTATTTGGTTGATTGGGGTGATTCTGTTGCATTCATTAGTGGAAAATTTGGTGTTAACTTCAAAACCACTCTTGTAGCTAATACACTTACTTTAACACACTCTACAATTTATCCTTTTACAACACTTCTTGTTCCTCTTTTTGATAAGCCTAAAAGCTCTCAAATTCAAGCACATCAACAACCTTCTCCTTCATCAACCTCGCCTTCCTCTTCTCCTTCGACCGATAGAAAATCAAAAAAAACTTTGGTTTATGTTGTGGTTGGAGTACTTGGAGGACTAGTAGTTATAGGCTTAACATTAATTCTATGTGCTTTATTTTACTTCAAAAAGGGTAAAAAGAAAGATGATGTTTTGGTGAATGTTTCGGAGAGTACTATTTATTCGGCGAAAGAGAAGCCTGTGAAGAAAGAAGAAGAAGAATTGTTAGAGAGTATTATATCTGGTATAGGACAATCTTTCAAAGTGTATGATTTCGAGGAAATTAAGGTTGCAACAGATGATTTTAGTCCAAGTTTTTTGATCAAAGGTTGTGTTTATCGCGGTGTGATTAAAGGCGATTTGGCTGCGATTAAGAAAACAGAAGGAGATGTTTCGAAAGAGATACAAATTTTGAACAAAGTTAACCATTCTAATGTTATTCGCCTTTCGGGCGTTAGCTTCAACGAAGGACATTGGTATCTTGTTTACGAGTATGCTGCAAATGGATCATTAAGTGATTGGATATTTTCTAACAAGAAAATGAGTGATGAAAAGTTTCTGAGTTGGATTCAGAGAATGAAGATTGCATTGGATGTTGCAATAGGAGTTGAATATCTTCATAGTTTCACTTCACCTCCATATATTCATAAGGATCTAAAGTGTACTAATGTTCTTCTGGACAATGATTTCAAGGCAAAGGTTGCGAGTTTAAGGCTCGCGAGATGTGTGGGAGGATTGGATAATGATGATGATGAACAATTTGTTGCTACAAGACATATTGTTGGGACAAGAGGTTACATGGCGCCGGAGTATTTGGAAAACGGAATTGTTTCTACGAAGCTTGATGTTTATGCGTTCGGTGTGTTGATGTTGGAAATCGTCACGGGGAAAGAGGTTGCTGCTATTCTAGCAGAAGGTAATGAGAATCTGATAGATTTTTTAAGTGGTAATGAGAAGCTGAAGGAGTTAATTGATTCTTCGTTGCGAGGAAATTATCCGTTTGAGCTGGCTATGTTTGTGATTGAAATTGTTGAGAATTGTTTGAAGAAGGATCCGGGAAATCGTCCTACGATGGATGAGATTGTATCGGCTTTGTCAAGAACGTTGAACTCTTCATTGAGTTGGGAAATGTCAGTGAATGTTGCTAGATAG 1920 0.3833 MHLFPFPPIFIFPLLFFFYFTNISIILGQQPYIGLSTTACPRKGDSKSIRGYTCNGQTTCQAYLTFRSQPIYSSVSTISSLLGSNPSHLAEINSVSLNETFETNKMVIVPVNCSCSGNYYQANTSYVFQNTDTYFLVANNTFEGLSTCQALMHENHNPADIYPGRKLLVPLRCACPTKNQTENNIKYLLSYLVDWGDSVAFISGKFGVNFKTTLVANTLTLTHSTIYPFTTLLVPLFDKPKSSQIQAHQQPSPSSTSPSSSPSTDRKSKKTLVYVVVGVLGGLVVIGLTLILCALFYFKKGKKKDDVLVNVSESTIYSAKEKPVKKEEEELLESIISGIGQSFKVYDFEEIKVATDDFSPSFLIKGCVYRGVIKGDLAAIKKTEGDVSKEIQILNKVNHSNVIRLSGVSFNEGHWYLVYEYAANGSLSDWIFSNKKMSDEKFLSWIQRMKIALDVAIGVEYLHSFTSPPYIHKDLKCTNVLLDNDFKAKVASLRLARCVGGLDNDDDEQFVATRHIVGTRGYMAPEYLENGIVSTKLDVYAFGVLMLEIVTGKEVAAILAEGNENLIDFLSGNEKLKELIDSSLRGNYPFELAMFVIEIVENCLKKDPGNRPTMDEIVSALSRTLNSSLSWEMSVNVAR 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03158 639 MobiDBLite consensus disorder prediction 245 266 - -
Vivi2g03158 639 SMART serkin_6 362 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03158 639 Pfam Protein kinase domain 381 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03158 639 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 13 634 - -
Vivi2g03158 639 Pfam LysM domain 195 235 IPR018392 -
Vivi2g03158 639 FunFam PTI1-like tyrosine-protein kinase 3 422 635 - -
Vivi2g03158 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Vivi2g03158 639 SUPERFAMILY Protein kinase-like (PK-like) 341 626 IPR011009 -
Vivi2g03158 639 ProSiteProfiles Protein kinase domain profile. 331 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03158 639 Gene3D Phosphorylase Kinase; domain 1 329 421 - -
Vivi2g03158 639 Gene3D Transferase(Phosphotransferase) domain 1 423 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03158 Vivi-Chr2 132204441 132206825 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03158 10 634 Receptor kinase-like Gene Family AT2G23770 45.483 3.35e-176 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi2g03158 Pkinase 2.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03158 - - gmx:100779907 797.349