Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03156 ATGGGTTGGCTTACCAAGTTTCTCAATGGCTCTAATCATCGAATTTTGCGAGGGCGATACAATGGCAAACATGGTGATAATAGAATTTGGGATACTCAACATAGTTCAGTGGATGATTTGACGGATGTCGAGAAAGAAGATATCGACCGTGCTATTGCACTCTCTCTATCAGAGGAGGATCTGAAAGGGAAGAAAGTTGTTGAGGACGACTCTCGGTCTGAAGAAGACAATGAACTTTGTAAACTTGATGAGGAAGACGAGAATGTTGGTAAAGTTCAACGAGATGAAGATGAACTGCTAGCTAAAATTCAGCAGGAGGAAAATGAACGCCGTGCCAAAGATCAACTTGAGGAAGATGAGGAACTTGCTAAGGCAATTCAATTAAGTTTGAACGTTGGTTCTCCTCCTCGACATGGCAATGATTCTTTATCTCAACCTCCTCCCCCCCTCTTTCCACCTGGATTCAGAATCTGTGCTGGATGCAATGCTGAGATTGGCCATGGGAGATTTTTAAGTTGCATGGGAGGTGTCTGGCATCCACAATGCTTCTGTTGCCATACTTGCCATCTGCCAATCACTGATTATGAGTTTTCGATGAATAGCAACCGTCCTTACCATAAATCCTGCTACAAGGAGAAGCATCATCCAAGATGCGATGTTTGCAAGAATTTTATCCCGGCTAACTCAGCTGGCCTCATTGAGTATAGAGCTCACCCTTTCTGGATGCAAAAATACTGTCCAACACATGAGCTCGACGGCACTCCTCGTTGTTGTAGCTGTGAAAGAATGGAGCCAAAGGATTCAAAATATATTTTGCTTGATGATGGTCGAAAGCTATGTCTCGAGTGTCTTGACTCAGCAATAATGGATAGTCATGAATGCCAACCTCTCTACCTTGAAATACTAGATTTTTACGAAGGTTTAAATATGAAATTGGAGCAGCAAGTTCCTATGCTTTTGGTCGAGAGACAGGCATTGAATGAGGCCATGGAGGGAGAAAAGAATGGTCATCACCATTTACCTGAAACTAGAGGACTATGCTTGTCGGAAGAGCAGACTGTTACCACCATTTTAAAAAGACCAAAGATTGGGGCAGGACACCGAGTCACGGACATGATAACTGAGCCTTATAGACTGACCCGTCGATGTGAGGTGACAGCCGTACTTGTTTTGTATGGGCTACCTAGGCTGTTGACTGGATCAATCCTAGCTCACGAGATAATGCATGCATGGCTAAGGCTTAAAGGTTATCCGAACCTGAGTCCAGAAGTTGAAGAGGGAATCTGCCAAGTCTTGGCTCACATGTGGCTAGAATCAGAGCTCTATTCTGGATCTGGGAATAATAATGCACCATCTTCGTCTTCATCGTCATCATCGTCGTCAATACCACCGTCCACTGCTGCGTCATCAAAGAAGGGTAAACGGTCTGATTTTGAGAAGAAACTTGGGGAGTTTTTCAAACACCAGATTGAGTCCGATACCTCGTCAGCCTATGGAGATGGATTCAGATTGGGTAACAAGGCAGTACTTAAGTATGATCTTAAAAGTACCCTTGATCATATCCACTTGACCGGAACTTTTCCATGTTGA 1590 0.4384 MGWLTKFLNGSNHRILRGRYNGKHGDNRIWDTQHSSVDDLTDVEKEDIDRAIALSLSEEDLKGKKVVEDDSRSEEDNELCKLDEEDENVGKVQRDEDELLAKIQQEENERRAKDQLEEDEELAKAIQLSLNVGSPPRHGNDSLSQPPPPLFPPGFRICAGCNAEIGHGRFLSCMGGVWHPQCFCCHTCHLPITDYEFSMNSNRPYHKSCYKEKHHPRCDVCKNFIPANSAGLIEYRAHPFWMQKYCPTHELDGTPRCCSCERMEPKDSKYILLDDGRKLCLECLDSAIMDSHECQPLYLEILDFYEGLNMKLEQQVPMLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTVTTILKRPKIGAGHRVTDMITEPYRLTRRCEVTAVLVLYGLPRLLTGSILAHEIMHAWLRLKGYPNLSPEVEEGICQVLAHMWLESELYSGSGNNNAPSSSSSSSSSSIPPSTAASSKKGKRSDFEKKLGEFFKHQIESDTSSAYGDGFRLGNKAVLKYDLKSTLDHIHLTGTFPC 529
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03156 529 SMART uim 117 136 IPR003903 -
Vivi2g03156 529 SMART uim 43 62 IPR003903 -
Vivi2g03156 529 CDD LIM_DA1 158 210 - -
Vivi2g03156 529 MobiDBLite consensus disorder prediction 62 91 - -
Vivi2g03156 529 Pfam LIM domain 158 213 IPR001781 -
Vivi2g03156 529 Gene3D Cysteine Rich Protein 155 215 - -
Vivi2g03156 529 PANTHER PROTEIN DA1-RELATED 2 3 528 IPR045218 -
Vivi2g03156 529 SMART lim_4 157 209 IPR001781 -
Vivi2g03156 529 Pfam Protein DA1 307 523 IPR022087 -
Vivi2g03156 529 MobiDBLite consensus disorder prediction 447 475 - -
Vivi2g03156 529 Coils Coil 89 122 - -
Vivi2g03156 529 CDD UDM1_RNF168_RNF169-like 72 124 - -
Vivi2g03156 529 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 117 136 IPR003903 -
Vivi2g03156 529 FunFam Protein DA1-related 1 152 211 - -
Vivi2g03156 529 ProSiteProfiles LIM domain profile. 156 216 IPR001781 -
Vivi2g03156 529 ProSitePatterns LIM zinc-binding domain signature. 158 192 IPR001781 -
Vivi2g03156 529 MobiDBLite consensus disorder prediction 447 471 - -
Vivi2g03156 529 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 150 183 - -
Vivi2g03156 529 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 185 241 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi2g03156 Vivi-Chr2 132137701 132141583 Dispersed/Tandem
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi2g03156 DA1-like 4.4e-103 CL0126
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03156 - - vvo:131652152 997.267