Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03145 ATGGCTATCTTTCTTCCTTCTAGTTCTCATGCTCTTTTTCTTGCACTCATGTTGTTTTATGTCACTAATATTTCAGCTCAACCACTACAACTCAGTGGAACAAACTTTTCATGCCCGGTGGATTCACCTCCTTCGTGTGAAACCTATGTGACATACTTTGCTCGGTCTCCAAATTTTTTGAGCCTAACAAACATATCAGATATATTTGATATGAGTCCTTTATCCATTGCAAAAGCCAGTAACATAGAAGATGAGGACAAGAAGCTGGTTGAAGGCCAAGTCTTACTAGTACCTGTAACTTGTGGTTGCACTAGAAATCGCTATTTTGCGAATTTCACTTACACAATCAAGCTAGGTGACAACTATTTCATAGTTTCAACCACTTCATACCAGAATCTTACCAATTATGTGGAATTCGAAAATTTCAACCCTAATCTAAGTCCAAATCTATTGCCACCAGATATCAAAATTGTAGTCCCTTTATTCTGCAAATGCCCTTCAAAGAATCAGTTGAACAAAGGAATAAAGTATCTGATTACTTATGTGTGGCAGTCTAATGATAATGTTACCCTTGTAAGTTCCAAGTTTGGTGCATCACAGGTGGACATGTTTACTGAAAACAATCAAAACTTCACTGCTTCAACCAACGTTCCGATTTTGATCCCCGTGACAAAGTTACCGGTAATTGATCAACCGTCTTCAAATGGAAGAAAAAACAGCATTCGAAAACCTGCTTTTATAATTGGTGTTAGCCTAGGAAGTGCTTTTTTCATTATAGTTTTAACACTATCACTTGTTTATGTATATTGTCTGAAAATGAAGAGATTGAATAGGAGTACTTCATTGGCGGAGACTGCGGATAAGTTACTTTCAGGTGTTTCGGGTTACGTAAGCAAGCCAACAATGTATGAAATGGATGCGATCATGGAAGGTACAATGAACCTGAGTGAGAATTGTAAGATTGGTGAATCAGTTTACAAGGCTAATATAGATGGTAGGGTTTTAGCAGTGAAAAAAATCAAGAAAGATGCTTCCGAGGAGCTGAAAATTCTGCAGAAGGTAAATCATGGAAATCTTGTGAAACTTATGGGCGTATCTTCCGACAACGATGGGAACTGTTTCCTTGTTTATGAGTATGCTGAAAATGGATCACTTGATGAGTGGTTATTCTCGGAGTCGTCGAAAACTTCGAACTCGGTGGTTTCGCTTACATGGTCTCAGAGAATAACAGTAGCAGTGGATGTTGCAGTTGGTCTGCAATACATGCATGAACATACTTACCCAAGAATAATCCACAGAGACATCACAACAAGTAATATCCTTCTTGATTCAAATTTTAAGGCCAAGATTGCAAATTTTTCCATGGCTAGAACTTCAACCAACTCAATGATGCCAAAAATTGATGTTTTCGCTTTTGGGGTGGTTCTGATTGAGTTGCTTACCGGCAAGAAAGCGGTAACAACAAAGGAAAATGGTGAGGTGGTTATTCTGTGGAAGGATTTCTGGAAGATTTTTGATCTAGAAGGGAATAGAGAAGAGAGCTTGAGAAAATGGATGGATCCTAAGCTAGAGAATTTTTATCCTATCGATAATGCTCTTAGTTTGGCTTCTTTGGCAGTAAATTGTACTGCAGATAAATCATTGTCAAGACCAAGCATCGCAGAAATTGTTCTTTGTCTTTCTCTTCTCAATCAATCATCATCTGAACCAATGTTGGAAAGATCCTTGACATCTGGTTTAGATGCTGAAGCTACTCATGTTGTTACTTCTATAGTAGCTCGTTGA 1785 0.381 MAIFLPSSSHALFLALMLFYVTNISAQPLQLSGTNFSCPVDSPPSCETYVTYFARSPNFLSLTNISDIFDMSPLSIAKASNIEDEDKKLVEGQVLLVPVTCGCTRNRYFANFTYTIKLGDNYFIVSTTSYQNLTNYVEFENFNPNLSPNLLPPDIKIVVPLFCKCPSKNQLNKGIKYLITYVWQSNDNVTLVSSKFGASQVDMFTENNQNFTASTNVPILIPVTKLPVIDQPSSNGRKNSIRKPAFIIGVSLGSAFFIIVLTLSLVYVYCLKMKRLNRSTSLAETADKLLSGVSGYVSKPTMYEMDAIMEGTMNLSENCKIGESVYKANIDGRVLAVKKIKKDASEELKILQKVNHGNLVKLMGVSSDNDGNCFLVYEYAENGSLDEWLFSESSKTSNSVVSLTWSQRITVAVDVAVGLQYMHEHTYPRIIHRDITTSNILLDSNFKAKIANFSMARTSTNSMMPKIDVFAFGVVLIELLTGKKAVTTKENGEVVILWKDFWKIFDLEGNREESLRKWMDPKLENFYPIDNALSLASLAVNCTADKSLSRPSIAEIVLCLSLLNQSSSEPMLERSLTSGLDAEATHVVTSIVAR 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03145 594 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 12 568 - -
Vivi2g03145 594 Gene3D Transferase(Phosphotransferase) domain 1 463 576 - -
Vivi2g03145 594 ProSiteProfiles LysM domain profile. 112 159 IPR018392 -
Vivi2g03145 594 Gene3D Transferase(Phosphotransferase) domain 1 380 462 - -
Vivi2g03145 594 Gene3D Phosphorylase Kinase; domain 1 290 379 - -
Vivi2g03145 594 SUPERFAMILY Protein kinase-like (PK-like) 319 561 IPR011009 -
Vivi2g03145 594 ProSitePatterns Tyrosine protein kinases specific active-site signature. 430 442 IPR008266 GO:0004672|GO:0006468
Vivi2g03145 594 ProSiteProfiles Protein kinase domain profile. 283 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03145 594 FunFam Serine/threonine receptor-like kinase NFP 274 379 - -
Vivi2g03145 594 Pfam Protein tyrosine and serine/threonine kinase 341 461 IPR001245 GO:0004672|GO:0006468
Vivi2g03145 594 FunFam serine/threonine receptor-like kinase NFP 462 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03145 Vivi-Chr2 131992546 131995064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03145 45 561 Receptor kinase-like Gene Family AT2G23770 29.655 4.12e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi2g03145 PK_Tyr_Ser-Thr 5.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03145 - - cam:101515074 907.901