Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03144 ATGCATCTCTTTCCCTTCATTTTCCCTCTCTTATTCTTCTTCTTCATCACCAACATCTCCATCAACCTAGGACAACAACCTTACATTGGCCTATCCACAACAGCCTGTCCTCGAAAAGGCGACTCCAAATCAATCCGCGGCTACACATGTAACGGCCAAACTCACACATGCCAAGCATACCTCACCTTCAGATCCCAACCAATTTACAGTTCAGTTTCAACCATATCATCCTTACTAGGCTCAAACCCTTCTCAACTCGCCGAAATCAACTCAGTTTCCTTAAACGAAACCTTCGAAACAAACAAAATGGTAATTGTTCCAGTCAACTGTTCTTGTTCTGGTAACTACTACCAAGCAAACACTTCCTATGTTTTTCAAAACACAGACACTTATTTCCTAGTTGCTAACAACACTTTCGAAGGCCTTTCGACTTGTCAAGCTTTGATGCATGAGAATCATAACCCTGCTGATATATATCCTGGTAGAAAATTGCTTGTTCCTCTTAGATGTGCTTGTCCTACAAAGAATCAAACTGAAAACAACATTAAGTATCTCTTAAGCTATTTGGTTGATTGGGGTGATTCTGTTGCATTCATTAGTGGAAAATTTGGTGTTAATTTCAAAACCACTCTTGTAGCTAATACACTTACTTTAACACAGTCTACAATTTATCCTTTTACAACACTTCTTGTTCCTCTTTTTGATAAGCCTAAGAGTTCTCAAATTCAAGCACATCAACAACCTTCTCCTTCGTCAACCTCGCCTTCCTCTTCTCCTTCGACCGATAGAAAATCGAAAAAAACTTTGGTTTATGTTGTGGTTGGAGTACTTGGAGGACTAGTAGTTATAGGTTTAGCATTAATTCTATTTGCTTTATTTTTCTTCAAAAAGGGTAAAGAGAAAGATGATTTTTCGGTGAATGTTTCGGAGAGTACTATTTATTCGGCGAAAGAGAAGCCTGTGAAGAAAGAAGAAGAAAAATTGTTAGAGAGTATTATATCTGGTATAGGCCAATCTTTCAAAGTGTATGATTTTGAGGAAATTAAGGTTGCAACAGATGATTTTAGTCCAAGTTTTTTGATCAAAGGTTGTGTTTATCGCGGTGTGATTAAAGGCGATTTGGCAGCAATTAAGAAAACAGAAGGAGATGTTTCGAAAGAGATACAAATTTTGAACAAAGTTAACCATTCTAATGTTATTCGTCTTTCGGGCGTTAGCTTCAATGAAGGACATTGGTATCTAGTTTATGAATATGCTGCGAATGGATCGTTAAGCGATTGGATATTTTCTAACAAGAAAATGAGTGATGAGAAGTTTCTTAGTTGGATTCAGAGAATGAAGATTGCATTGGATGTTGCAACAGGAGTTGAATATCTTCATAGTTTCACTTCACCTCCATATATTCATAAGGATCTAAAGTGTACTAATGTTCTTCTGGACAATGATTTCAAGGCAAAGGTTGCGAGTTTAAGGCTCGCGAGATGTGTGGGAGGATTGGATAATGATGATGATGAACAATTTGTTGCTACAAGACATATTGTTGGGACAAGAGGTTACATGGCACCGGAGTATTTGGAAAACGGAATTGTTTCTACGAAGCTTGATGTTTATGCGTTCGGTGTGTTGATGTTGGAAATCGTCACGGGGAAAGAGGTTGCTGCTATTCTAGCAGAAGGTAATGAGAATCTGATAGATTTTTTAAGTGGTGATGAGAAGCTGAAGGACTTGATTGATTCTTCGTTGCGAGGAAATTATCCATTTGAACTTGCAATGTTTGTGATTGAAATTGTTGAGAATTGTTTGAAGAAGGATCCGGGAAATCGTCCTACGATGGATGAGATTGTATCGGCTTTGTCAAGAACGTTGAACTCTTCATTGAGTTGGGAAATGTCAGTGAATGTTGCTAGATAG 1911 0.3794 MHLFPFIFPLLFFFFITNISINLGQQPYIGLSTTACPRKGDSKSIRGYTCNGQTHTCQAYLTFRSQPIYSSVSTISSLLGSNPSQLAEINSVSLNETFETNKMVIVPVNCSCSGNYYQANTSYVFQNTDTYFLVANNTFEGLSTCQALMHENHNPADIYPGRKLLVPLRCACPTKNQTENNIKYLLSYLVDWGDSVAFISGKFGVNFKTTLVANTLTLTQSTIYPFTTLLVPLFDKPKSSQIQAHQQPSPSSTSPSSSPSTDRKSKKTLVYVVVGVLGGLVVIGLALILFALFFFKKGKEKDDFSVNVSESTIYSAKEKPVKKEEEKLLESIISGIGQSFKVYDFEEIKVATDDFSPSFLIKGCVYRGVIKGDLAAIKKTEGDVSKEIQILNKVNHSNVIRLSGVSFNEGHWYLVYEYAANGSLSDWIFSNKKMSDEKFLSWIQRMKIALDVATGVEYLHSFTSPPYIHKDLKCTNVLLDNDFKAKVASLRLARCVGGLDNDDDEQFVATRHIVGTRGYMAPEYLENGIVSTKLDVYAFGVLMLEIVTGKEVAAILAEGNENLIDFLSGDEKLKDLIDSSLRGNYPFELAMFVIEIVENCLKKDPGNRPTMDEIVSALSRTLNSSLSWEMSVNVAR 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03144 636 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 9 631 - -
Vivi2g03144 636 MobiDBLite consensus disorder prediction 242 263 - -
Vivi2g03144 636 SUPERFAMILY Protein kinase-like (PK-like) 338 623 IPR011009 -
Vivi2g03144 636 Gene3D Transferase(Phosphotransferase) domain 1 420 632 - -
Vivi2g03144 636 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Vivi2g03144 636 SMART serkin_6 359 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03144 636 Pfam LysM domain 192 232 IPR018392 -
Vivi2g03144 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Vivi2g03144 636 FunFam PTI1-like tyrosine-protein kinase 3 419 632 - -
Vivi2g03144 636 ProSiteProfiles Protein kinase domain profile. 328 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03144 636 Pfam Protein kinase domain 378 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03144 Vivi-Chr2 131978370 131980529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03144 3 631 Receptor kinase-like Gene Family AT2G23770 45.426 2.25e-178 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi2g03144 Pkinase 1.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03144 - - gmx:100779907 794.653