Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03092 ATGTCACTCGCCTGTTCCTCAAAGAATGTCGAAAACAGGTCAAGTGATAGTATTGTTTCTGATGGTTTTGTCTTTGATATTGATCCTAGTTTGTTGCTGGATTTTGATAAACTGGTCATTGATGAGATCATCGGAGAAGGCTCAGATTCCATTGTATACCGAGGATGGTATGAAGATCATCCGGTGGCTATTAAAGCTATGCAACCGGAGAACACAAAGGATGCACCGCCTGAATCTAAGCTCAAATTCGAGAGGGAGGTGAAGCTTTTATCTAAGATTCAACATACAAATGTTGTAAAGTTTATTGGAGCCACTGTGGAACCATCAATGATGATAATCACAGAACTACTAGAAGGTGGTTCACTTCAGAAAACCATGAAGAGTATCTATCCAATAACTTTCTCATTGGAACAATGTTTGAGTTATGCTCTTGATATATCACAAGCTATGGAGTATTTGCATTCTAATGGCATCATTCACCGTGATCTCAAGCCTGGTAATTTACTGCTTACAAAAGACAAGAATAATATTAAACTTGCTGATTTTGGGATAGCTAGAGAGAATATATGTGATGAGATGACTTGTGAAGCTGGTACCTATAGATACATGGCTCCTGAGATTTTAAGCAAAGATCCACTTCCAAAAGGAGCAAAGAAAAGCTATGACCACAAAGCTGATGTGTACAGTTTTGGAATGGTTCTTTGGTCTATGATCAAAAACCAAACTCCATTTAAAGATAGAAAAGATTTCATGGCTGCATATGCTACCGTAAACAATATGAGGCCAAGTTTGGATGATTTTCCTGAAGTGATAACTCCCTTGGTGCAATCTTGTTGGAGTGAAGACCCAAAACTCAGACCAGAATTCAAGGAAATCACTGGAATGCTGATAAGGATTCTTCATGATATTTACACAGCAAAGATTAATGCACTTGCAAGGTTACAAAGGTTTGAAGATGTTATTAACAAAAGTGATGAAGAAATATCAAATGCACAACATGCTCCAACTAGCTTTGAATCAACTATGGAGAATGAAAACAACTCCAAACATGAGATTGAGACAATGAAGCCTAATGGTGAAACAGATAGTGATTCTGATCAGAAGAAGTCAAAAAAGAAAAATAAGATCAAACGCTTTTTTTCTTTTTTCCGTAGTTGCATTTGCTTTTGA 1170 0.3701 MSLACSSKNVENRSSDSIVSDGFVFDIDPSLLLDFDKLVIDEIIGEGSDSIVYRGWYEDHPVAIKAMQPENTKDAPPESKLKFEREVKLLSKIQHTNVVKFIGATVEPSMMIITELLEGGSLQKTMKSIYPITFSLEQCLSYALDISQAMEYLHSNGIIHRDLKPGNLLLTKDKNNIKLADFGIARENICDEMTCEAGTYRYMAPEILSKDPLPKGAKKSYDHKADVYSFGMVLWSMIKNQTPFKDRKDFMAAYATVNNMRPSLDDFPEVITPLVQSCWSEDPKLRPEFKEITGMLIRILHDIYTAKINALARLQRFEDVINKSDEEISNAQHAPTSFESTMENENNSKHEIETMKPNGETDSDSDQKKSKKKNKIKRFFSFFRSCICF 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03092 389 Coils Coil 314 334 - -
Vivi2g03092 389 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 303 - -
Vivi2g03092 389 ProSiteProfiles Protein kinase domain profile. 38 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03092 389 Pfam Protein kinase domain 40 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03092 389 PRINTS Tyrosine kinase catalytic domain signature 267 289 IPR001245 GO:0004672|GO:0006468
Vivi2g03092 389 PRINTS Tyrosine kinase catalytic domain signature 152 170 IPR001245 GO:0004672|GO:0006468
Vivi2g03092 389 PRINTS Tyrosine kinase catalytic domain signature 114 127 IPR001245 GO:0004672|GO:0006468
Vivi2g03092 389 PRINTS Tyrosine kinase catalytic domain signature 225 247 IPR001245 GO:0004672|GO:0006468
Vivi2g03092 389 MobiDBLite consensus disorder prediction 328 373 - -
Vivi2g03092 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Vivi2g03092 389 SMART serkin_6 38 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g03092 389 MobiDBLite consensus disorder prediction 328 343 - -
Vivi2g03092 389 CDD STKc_MAP3K-like 44 296 - -
Vivi2g03092 389 Gene3D Phosphorylase Kinase; domain 1 29 118 - -
Vivi2g03092 389 SUPERFAMILY Protein kinase-like (PK-like) 31 310 IPR011009 -
Vivi2g03092 389 MobiDBLite consensus disorder prediction 344 370 - -
Vivi2g03092 389 Gene3D Transferase(Phosphotransferase) domain 1 119 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03092 Vivi-Chr2 130914584 130916606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03092 20 303 MAP Kinase Kinase Kinase AT5G66710 52.281 7.30e-106 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vivi2g03092 Pkinase 1.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03092 - K04427 gsj:114390113 393.275